PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC045199.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 378aa    MW: 40931.8 Da    PI: 7.0416
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC045199.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.4e-30211269259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    Dg++WrKYGqK+ kg+++pr+YYrC++a gCpv+k+v+r+aed++++++tYeg+Hnh+
  EcC045199.30 211 ADGCQWRKYGQKMAKGNPCPRAYYRCSMAiGCPVRKQVQRCAEDKTILVTTYEGQHNHP 269
                   7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-33195271IPR003657WRKY domain
SuperFamilySSF1182901.44E-27203271IPR003657WRKY domain
PROSITE profilePS5081129.677205271IPR003657WRKY domain
SMARTSM007743.4E-36210270IPR003657WRKY domain
PfamPF031061.7E-26212269IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006396Biological ProcessRNA processing
GO:0006508Biological Processproteolysis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003723Molecular FunctionRNA binding
GO:0004190Molecular Functionaspartic-type endopeptidase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
TGLNLLTENI GSDKSLVDEE APGNEQRCLN LTEMAVLKAE LDRMNIENQR LKSMIYQVNN  60
NCHALQGHLL SLMQRHGANP PAETADSDKV FVNVNGRTLE DREKFPGKDE NSQSFSGDKT  120
RDGLGSPHNN IVESMEYFKT PRESSANEVT PFRDPNKSES IDHRQRRDDA PWSPTKVQKI  180
GSSADQAAET MAMIKKARVS VRARSEAAMI ADGCQWRKYG QKMAKGNPCP RAYYRCSMAI  240
GCPVRKQVQR CAEDKTILVT TYEGQHNHPL PQAAVAMAST TSSAASMILS GSMASSDGMM  300
ANSHYITGTA SFPVLSNQMN QAPSDMANTA GTTAAITADP NFTAALVAAI ASVVGGIHPN  360
HGGASDDVIT RSRINENT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-22197271174WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060309.20.0PREDICTED: WRKY transcription factor 42
TrEMBLA0A059BLU10.0A0A059BLU1_EUCGR; Uncharacterized protein
STRINGXP_010060309.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-54WRKY family protein