PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC044424.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 63aa    MW: 6984.2 Da    PI: 10.4741
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC044424.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.41.6e-081647132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     +g W++ Ed++l+d+vk +G g W ++ +  g
     EcC044424.10 16 KGVWSALEDQILIDYVKVHGQGKWGKVRKVTG 47
                     799*********************99987655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.1561150IPR017877Myb-like domain
SuperFamilySSF466898.97E-81246IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.0E-101245IPR009057Homeodomain-like
PfamPF002492.4E-61645IPR001005SANT/Myb domain
CDDcd001671.95E-51947No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    Send to blast
MGRNPSSGKD GLKLKKGVWS ALEDQILIDY VKVHGQGKWG KVRKVTGELR PLGSYYISPC  60
KLP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010049278.19e-25PREDICTED: transcription factor WER
RefseqXP_010051337.11e-24PREDICTED: transcription factor MYB82
TrEMBLA0A059CTT82e-23A0A059CTT8_EUCGR; Uncharacterized protein
TrEMBLA0A059CUD02e-23A0A059CUD0_EUCGR; Uncharacterized protein
STRINGXP_010049278.13e-24(Eucalyptus grandis)
STRINGXP_010051337.14e-24(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G40330.12e-08myb domain protein 23