PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC044311.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 416aa    MW: 45680.2 Da    PI: 8.8617
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC044311.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32.1e-30232290259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed  ++++tYeg+Hnh+
  EcC044311.10 232 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRGILITTYEGNHNHP 290
                   7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.9E-33216292IPR003657WRKY domain
SuperFamilySSF1182908.76E-28224292IPR003657WRKY domain
PROSITE profilePS5081129.402226292IPR003657WRKY domain
SMARTSM007741.7E-36231291IPR003657WRKY domain
PfamPF031062.8E-26233290IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
IFFLQQLQHL NVELQRMNSE NQRLKEMLSQ VTSNYNALQL HLSSLLQQQH QHHIQHQHQS  60
NGAEPAQDHE VSFSSCERSS LRNEKKKVFM GLNRSDASRP ELQNAMKKNQ TVVPRQFLDL  120
GPMSVAAVET DEISNSSSEE RTRDGSRSPL TKMEVASSAH NNKAEQDSSG ARDGDKRGVR  180
NESPDDSETQ GWGPNKAAKL EAARTSIEQS AEATMRKARV SVRARSEAPM ITDGCQWRKY  240
GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRGILI TTYEGNHNHP LPPAAMAMAS  300
TTAAAVSMLL SGSMSSADGI MNPNLLARAI LPCSSSMATI SASAPFPTVT LDLTHSPNPL  360
QIQRPQPQFQ VPFPGQPQNF GSLPSQSLPP AFGQALYNQS KFSGLQLSQD LANSSQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-22218294176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057907.10.0PREDICTED: probable WRKY transcription factor 31 isoform X1
SwissprotQ9XEC31e-119WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A059CAH40.0A0A059CAH4_EUCGR; Uncharacterized protein
STRINGXP_010057907.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM105728107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-105WRKY family protein