PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC043555.60
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 262aa    MW: 29225.3 Da    PI: 10.0591
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC043555.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1023.5e-32179237159
                   ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                   ldDg++WrKYGqK vk+s++prsYYrC++  C+vkk+v+r +ed+++v++tYeg Hnh+
  EcC043555.60 179 LDDGFRWRKYGQKAVKNSTHPRSYYRCAHIACNVKKQVQRLSEDTSIVVTTYEGIHNHP 237
                   59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.1E-33166238IPR003657WRKY domain
SuperFamilySSF1182902.09E-28171238IPR003657WRKY domain
PROSITE profilePS5081128.449174239IPR003657WRKY domain
SMARTSM007742.2E-38179238IPR003657WRKY domain
PfamPF031061.2E-25180237IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006508Biological Processproteolysis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008233Molecular Functionpeptidase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MFRLYVALRV RGSVQPLHLP RPFSRSISFG KSCALTQSEI SIMERQEAPP PPPPPPPPPP  60
PPQGIPSLPP LLPQNPPYVV ADSSSHPPPI DTHRVLEEIN SLVSLASGSA SAWIDGRGTL  120
DGDAARHEAS LVASEYRTAM EEIRARRLEK RSKAAASSRA RKAASPRFEF QTRSEDDLLD  180
DGFRWRKYGQ KAVKNSTHPR SYYRCAHIAC NVKKQVQRLS EDTSIVVTTY EGIHNHPSEK  240
IMETLSPLLR QIQLLSRFSP DK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-22171236974Probable WRKY transcription factor 4
2lex_A2e-22171236974Probable WRKY transcription factor 4
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053764.11e-158PREDICTED: probable WRKY transcription factor 75
STRINGXP_010053764.11e-158(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64000.11e-49WRKY DNA-binding protein 56