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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | EcC041360.10 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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| Family | WRKY | ||||||||
| Protein Properties | Length: 37aa MW: 4127.72 Da PI: 9.3752 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 43 | 8.7e-14 | 3 | 36 | 25 | 58 |
EEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 25 YrCtsagCpvkkkversaedpkvveitYegeHnh 58
Y Ct++gC+vkk+v+r ++d+ vv++tY+g+Hn
EcC041360.10 3 YCCTHSGCNVKKQVQRLTKDEGVVVTTYKGTHNT 36
99******************************96 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS50811 | 12.61 | 1 | 37 | IPR003657 | WRKY domain |
| Pfam | PF03106 | 9.6E-10 | 2 | 35 | IPR003657 | WRKY domain |
| SuperFamily | SSF118290 | 9.55E-11 | 3 | 36 | IPR003657 | WRKY domain |
| SMART | SM00774 | 0.0038 | 3 | 37 | IPR003657 | WRKY domain |
| Gene3D | G3DSA:2.20.25.80 | 2.9E-11 | 3 | 36 | IPR003657 | WRKY domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 37 aa Download sequence Send to blast |
KLYCCTHSGC NVKKQVQRLT KDEGVVVTTY KGTHNTS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G41570.1 | 1e-12 | WRKY DNA-binding protein 24 | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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