PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Binding Motif |

Orthologous Group |

Basic Information? help Back to Top

TF ID

EcC039152.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 215aa MW: 23173.4 Da PI: 4.031

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC039152.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.6	3.1e-09	136	178	4	46
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +k++rr +N+ AA rsR+RK+ +++eLe k+k +e+e ++L EcC039152.10 136 SKKQRRQLRNKDAAARSRERKRSYVKELEMKSKYMEGECRRLG 178 79**********************************9988775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.4E-11	130	194	No hit	No description
SMART	SM00338	2.2E-5	133	197	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.841	135	192	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.0E-7	137	192	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.55E-9	137	193	No hit	No description
CDD	cd14704	1.07E-14	138	189	No hit	No description
PROSITE pattern	PS00036	0	140	155	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0010200	Biological Process	response to chitin
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response
GO:0005634	Cellular Component	nucleus
GO:0005789	Cellular Component	endoplasmic reticulum membrane
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence Send to blast
MENPDILGDD LALEFDFQSL FDELSPDAAG LLDASDVDAS SPGSLSSWIG EIEGMLMKDD 60 EEAVAVEPSQ EVFDRFFAGL LVDSPEGGPA EATDGASDKE SNSSGGGGGG GGERDEKLVV 120 GDNELSEDAD DDDPVSKKQR RQLRNKDAAA RSRERKRSYV KELEMKSKYM EGECRRLGRL 180 LQCFVAENQA LRLNLENGGA YGATMAKQES AVLLL

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00019	PBM	Transfer from AT1G42990	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010063178.1	1e-138	PREDICTED: bZIP transcription factor 60
TrEMBL	A0A059BW84	1e-136	A0A059BW84_EUCGR; Uncharacterized protein
STRING	XP_010063178.1	1e-137	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM4634	28	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	4e-26	basic region/leucine zipper motif 60