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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC038389.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 94aa MW: 10538.1 Da PI: 10.2212 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 57.2 | 3.8e-18 | 42 | 94 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGs..ekAtPktilelmkvkgLtlehvkSHLQ 51 k r+rWt+ LH++F e v++LGG+ A Pk il+lm+vkg+ + h+kSH Q EcC038389.10 42 KRRIRWTQLLHNQFHEWVNRLGGAgsTGAKPKLILKLMDVKGVKIFHIKSHVQ 94 68********************8622679**********************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.0E-17 | 40 | 94 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.06E-9 | 40 | 94 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.8E-11 | 42 | 94 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence Send to blast |
SRSVNCESLV YDHSEDLQCL APQSHDDPRG NSILPAAAIS SKRRIRWTQL LHNQFHEWVN 60 RLGGAGSTGA KPKLILKLMD VKGVKIFHIK SHVQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019187721.1 | 1e-18 | PREDICTED: uncharacterized protein LOC109182119 | ||||
Swissprot | Q0WVU3 | 2e-14 | PHL5_ARATH; Myb family transcription factor PHL5 | ||||
TrEMBL | A0A061F4K8 | 1e-16 | A0A061F4K8_THECC; Myb-like HTH transcriptional regulator family protein, putative isoform 1 | ||||
STRING | EOY09469 | 2e-17 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 5e-17 | G2-like family protein |