PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

EcC038389.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

G2-like

Protein Properties

Length: 94aa MW: 10538.1 Da PI: 10.2212

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC038389.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	57.2	3.8e-18	42	94	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGs..ekAtPktilelmkvkgLtlehvkSHLQ 51 k r+rWt+ LH++F e v++LGG+ A Pk il+lm+vkg+ + h+kSH Q EcC038389.10 42 KRRIRWTQLLHNQFHEWVNRLGGAgsTGAKPKLILKLMDVKGVKIFHIKSHVQ 94 68******************8622679********************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.0E-17	40	94	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.06E-9	40	94	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.8E-11	42	94	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 94 aa Download sequence Send to blast
SRSVNCESLV YDHSEDLQCL APQSHDDPRG NSILPAAAIS SKRRIRWTQL LHNQFHEWVN 60 RLGGAGSTGA KPKLILKLMD VKGVKIFHIK SHVQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019187721.1	1e-18	PREDICTED: uncharacterized protein LOC109182119
Swissprot	Q0WVU3	2e-14	PHL5_ARATH; Myb family transcription factor PHL5
TrEMBL	A0A061F4K8	1e-16	A0A061F4K8_THECC; Myb-like HTH transcriptional regulator family protein, putative isoform 1
STRING	EOY09469	2e-17	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.2	5e-17	G2-like family protein