PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 453aa MW: 49283.1 Da PI: 5.3731

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC033336.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.9	1.2e-09	262	316	9	63
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 r +NR +A rs +RK+ +i+eLe+kv++L+++ + L ++l l+ l +e+ EcC033336.10 262 RILSNRQSAARSKERKLRYIAELERKVQTLQTQATNLSSQLTVLQRDTTGLNTEN 316 5679************************************999988777666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-12	244	318	IPR004827	Basic-leucine zipper domain
CDD	cd14703	8.12E-23	262	308	No hit	No description
Pfam	PF00170	3.9E-8	262	316	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.53	262	319	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.2E-9	262	312	No hit	No description
SuperFamily	SSF57959	9.64E-10	262	310	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence Send to blast
MDNEMPHSHE GGTPSPDWST GFSQTNESFG DNSEQHASST LPLSVPAPTF VPEPGALGQG 60 AGETDSSQFG PDVGQMLDDP FMNLGHRRAH SEILIRPENG INVNGDHGVL GGGYEPIFPD 120 ENEEPDLYGI YLDMDRLNSS SAMTPLFQVE EPSSAAVALL SPPLPPPPAV AAPLAASTGP 180 ALVLGSGSAA VSAGERPRVK HHYSQSVDEL MTINPEMLAS SSEAPSGVDR KKALSAAKLA 240 ELALVDPRRA KRYYGNVFSG PRILSNRQSA ARSKERKLRY IAELERKVQT LQTQATNLSS 300 QLTVLQRDTT GLNTENHELK YRLQTMEQQV HLQDALNDAL KDEIEHLKVL TGQAMPNGAP 360 VMMPFAPFAH RPLFYPPYNS DPRPLFAAQQ LQQMQIQPPE MQHPFQVQHH PRPLQLQLPQ 420 LQQPTGGFSF GGPLHLAIQG DIHAADNSSD LRN

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence Send to blast

MDNEMPHSHE GGTPSPDWST GFSQTNESFG DNSEQHASST LPLSVPAPTF VPEPGALGQG  60
AGETDSSQFG PDVGQMLDDP FMNLGHRRAH SEILIRPENG INVNGDHGVL GGGYEPIFPD  120
ENEEPDLYGI YLDMDRLNSS SAMTPLFQVE EPSSAAVALL SPPLPPPPAV AAPLAASTGP  180
ALVLGSGSAA VSAGERPRVK HHYSQSVDEL MTINPEMLAS SSEAPSGVDR KKALSAAKLA  240
ELALVDPRRA KRYYGNVFSG PRILSNRQSA ARSKERKLRY IAELERKVQT LQTQATNLSS  300
QLTVLQRDTT GLNTENHELK YRLQTMEQQV HLQDALNDAL KDEIEHLKVL TGQAMPNGAP  360
VMMPFAPFAH RPLFYPPYNS DPRPLFAAQQ LQQMQIQPPE MQHPFQVQHH PRPLQLQLPQ  420
LQQPTGGFSF GGPLHLAIQG DIHAADNSSD LRN

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00126	DAP	Transfer from AT1G06070	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010025885.1	0.0	PREDICTED: probable transcription factor PosF21
Swissprot	Q04088	1e-93	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	A0A059AVA4	0.0	A0A059AVA4_EUCGR; Uncharacterized protein
STRING	XP_010025885.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM2445	27	72

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	2e-83	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]