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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
EcC031214.10 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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| Family |
C2H2 |
| Protein Properties |
Length: 244aa MW: 28301 Da PI: 5.0506 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EcC031214.10 | genome | ECGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 18.9 | 4.2e-06 | 37 | 62 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23
+ Cp dCgk++ + + Lk+Hi + H
EcC031214.10 37 HICPypDCGKRYAHEYKLKNHIASqH 62
679999****************9988 PP
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| 2 | zf-C2H2 | 15.7 | 4.2e-05 | 101 | 126 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23
y Cp C+k + + + Lk H+r+ H
EcC031214.10 101 YACPyeTCDKAYIHEYKLKLHLRReH 126
89**********************99 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 244 aa
Download sequence Send
to blast |
WMTGDTREPC MMDEMQAFSL DFNLRSHMKT HSQENYHICP YPDCGKRYAH EYKLKNHIAS 60
QHEKNAAVEV TKYTPPPEKI TTKASKPSSG AYGSASSDRP YACPYETCDK AYIHEYKLKL 120
HLRREHPEYM ADENAENATR NVDHEMDEAS DQDNYSRKRA NGKSQKQSRQ KLNLKTPPAK 180
PAKRKGAASP TPVTLNVVKK PWPVKEDIYE EEDSEETEED QENVEGWRYA ENNEDDDEET 240
EYED
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| Functional Description ? help
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| Source |
Description |
| UniProt | Dual-function transcription factor with both repression and activation activities. Binds to 5'-CCATATT-3' motif in target gene promoters (e.g. ABR1) (PubMed:26961720). Binds also to G-rich DNA motif 5'-GGGGGCAGTGG-3' (PubMed:22508367). Regulates the expression of genes involved in diverse cellular pathways, including glucose metabolism, photosynthesis, phototropism and stress response (e.g. salt, drought and osmotic stress) (PubMed:22508367, PubMed:26961720). Regulates plant immunity, especially during necrotrophic fungal infection (e.g. B.cinerea) (PubMed:24451981). Binds to ABR1 promoter and promotes its expression, thus negatively regulating the abscisic acid (ABA) signaling pathway. Represses ABA- and salt-responsive genes expression (PubMed:26961720). {ECO:0000269|PubMed:22508367, ECO:0000269|PubMed:24451981, ECO:0000269|PubMed:26961720}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in an ABI1- and ABI4-dependent manner. Stimulated by stress conditions including high salt, osmotic stress (e.g. mannitol) and dehydration. May be induced by ABI4 but repressed by ABR1. Repressed by darkness but induced by light. {ECO:0000269|PubMed:26961720}. |
| Publications
? help Back to Top |
- Kumekawa N,Hosouchi T,Tsuruoka H,Kotani H
The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 4.
DNA Res., 2001. 8(6): p. 285-90
[PMID:11853315] - Li T,Wu XY,Li H,Song JH,Liu JY
A Dual-Function Transcription Factor, AtYY1, Is a Novel Negative Regulator of the Arabidopsis ABA Response Network.
Mol Plant, 2016. 9(5): p. 650-661
[PMID:26961720] - Wu XY,Li T
A Casein Kinase II Phosphorylation Site in AtYY1 Affects Its Activity, Stability, and Function in the ABA Response.
Front Plant Sci, 2017. 8: p. 323
[PMID:28348572]
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