 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EcC028332.40 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
| Family |
NAC |
| Protein Properties |
Length: 145aa MW: 16733 Da PI: 7.501 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EcC028332.40 | genome | ECGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 80.2 | 4.4e-25 | 5 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97
lp G+rF P+de+ +++ L++kv+g+ + e i+e+d+y+ ePw++ k+ e+++y F+k + + ++r +r++ sgyW+ + +v++ ++
EcC028332.40 5 LPIGYRFCPSDEQAISYCLAPKVKGDVVFP-ELIHEFDVYEKEPWKFFD--KNAEESLYVFTKLKMR---KSRVERTAGSGYWRGAQS-SDVKDCHD 94
699**********************99555.78**************62..3456788***998776...469***********7654.67777789 PP
NAM 98 elvglkktLvfy.....kgrapkgektdWvmheyrl 128
+++glkk L f + +++++ek +W+mhey++
EcC028332.40 95 NVIGLKKHLNFKvkdgsSSNSQNTEKGSWIMHEYSV 130
9***********887665677888999*******86 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003714 | Molecular Function | transcription corepressor activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 145 aa
Download sequence Send
to blast |
MADTLPIGYR FCPSDEQAIS YCLAPKVKGD VVFPELIHEF DVYEKEPWKF FDKNAEESLY 60
VFTKLKMRKS RVERTAGSGY WRGAQSSDVK DCHDNVIGLK KHLNFKVKDG SSSNSQNTEK 120
GSWIMHEYSV PNQEVSRIHL FFVIC
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-15 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-15 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-15 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-15 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swm_B | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swm_C | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swm_D | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swp_A | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swp_B | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swp_C | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swp_D | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 4dul_A | 1e-15 | 4 | 130 | 16 | 142 | NAC domain-containing protein 19 |
| 4dul_B | 1e-15 | 4 | 130 | 16 | 142 | NAC domain-containing protein 19 |
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