PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC027232.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 351aa    MW: 37428.2 Da    PI: 8.5857
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC027232.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.8e-31118176259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d+ ++++tYeg+Hnh+
  EcC027232.10 118 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCADDKAILITTYEGNHNHP 176
                   7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.9E-33102178IPR003657WRKY domain
SuperFamilySSF1182907.06E-28111178IPR003657WRKY domain
PROSITE profilePS5081129.149112178IPR003657WRKY domain
SMARTSM007742.9E-37117177IPR003657WRKY domain
PfamPF031064.6E-27119176IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MTSMSSPTKS AQQLMDLRPA CAAIDNVKEE EKTREVSVSP TTTMEVMSKE SDHIHTPPLN  60
GTNNNHNIED GDRASQSWGS PKSPRLEPSK GGEEQLADMP FRKARVSVRA RSEAPSISDG  120
CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAD DKAILITTYE GNHNHPLPPA  180
ATAMANTTSA AAAMLLSGST TSKETLASTN PGYFPSLPYP STIATLSASA PFPTITLDLT  240
QNHNPMQLFP RPPPQASATF PLPLHGYAAQ MMGQVQHSMK LPAMPMVQPG LGQRHASLVE  300
SVSAAIASDP NFTAALAAAL STVMGGAPPR NGPDGNINAN NNNSGNNHFL P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-21104180176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010045571.10.0PREDICTED: probable WRKY transcription factor 47
SwissprotQ9XEC34e-75WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A059DCZ60.0A0A059DCZ6_EUCGR; Uncharacterized protein
STRINGXP_010045571.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM71562743
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01720.17e-71WRKY family protein