PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC026270.60
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 206aa    MW: 23201.6 Da    PI: 8.9985
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC026270.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM114.41.2e-3551382128
           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                   p+G+rF+Pt++elv+++L++k++gk   +   i+e+ iy++eP dL        ++ ++ +e++fF++   k ++++r+n  +t+ g+Wk t k++ 
  EcC026270.60   5 PVGLRFEPTEDELVDHHLRRKLKGKLEAF-CLIPELYIYSCEPPDLFIsynelsAIPSDGRECFFFCPCGDKIPNNRRSNNrMTELGFWKDTCKKRV 100
                   89*********************998555.78**************633555655666899*************98776544************999 PP

           NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   + s  +g+++g++k+Lv+y+gr+pkg+ktd vmhey+l
  EcC026270.60 101 IRSLvTGKQIGIRKILVYYEGRQPKGRKTDVVMHEYHL 138
                   98878999*****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-363159IPR003441NAC domain
PROSITE profilePS5100535.6934161IPR003441NAC domain
PfamPF023653.7E-205138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MAAWPVGLRF EPTEDELVDH HLRRKLKGKL EAFCLIPELY IYSCEPPDLF ISYNELSAIP  60
SDGRECFFFC PCGDKIPNNR RSNNRMTELG FWKDTCKKRV IRSLVTGKQI GIRKILVYYE  120
GRQPKGRKTD VVMHEYHLNS SVSDSKISGQ MAFVLCHIID RKRKKARSAK ACASASSSTS  180
GTPNDSGNGR SDEVSTEVTK NCCGLT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-24516216169Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160164RKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065767.11e-133PREDICTED: protein NTM1-like 9
RefseqXP_018733117.11e-133PREDICTED: protein NTM1-like 9
TrEMBLA0A058ZRY51e-133A0A058ZRY5_EUCGR; Uncharacterized protein
STRINGXP_010065767.11e-132(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.13e-37NAC domain containing protein 57