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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC019123.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 73aa MW: 8399.69 Da PI: 10.6378 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.3 | 2.7e-14 | 3 | 56 | 75 | 127 |
NAM 75 nratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +r+t sg+Wk++g+d +v+++ +++++g+kktLvf++g+ ++g++t v+hey+ EcC019123.10 3 KRSTPSGFWKKSGTDWNVKARdTNRVIGTKKTLVFHEGQGSNGVQTYRVIHEYH 56 799****************9977788***************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.436 | 1 | 73 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.9E-6 | 3 | 56 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.7E-13 | 3 | 60 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 73 aa Download sequence Send to blast |
MVKRSTPSGF WKKSGTDWNV KARDTNRVIG TKKTLVFHEG QGSNGVQTYR VIHEYHPLAK 60 MYPIYPHLVI TIN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010065925.1 | 4e-23 | PREDICTED: uncharacterized protein LOC104453109 isoform X1 | ||||
Refseq | XP_010065926.1 | 4e-23 | PREDICTED: uncharacterized protein LOC104453109 isoform X2 | ||||
TrEMBL | A0A058ZU93 | 3e-17 | A0A058ZU93_EUCGR; Uncharacterized protein | ||||
TrEMBL | A0A059BB60 | 5e-17 | A0A059BB60_EUCGR; Uncharacterized protein | ||||
TrEMBL | A0A059BC60 | 4e-17 | A0A059BC60_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065925.1 | 1e-22 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1982 | 19 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01520.1 | 5e-14 | NAC domain containing protein 67 |