PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC014449.180
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 566aa    MW: 63365.5 Da    PI: 4.5465
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC014449.180genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.74e-52211472128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    ppGfrFhPtdeelv +yLk+k+ ++kl+l ++i+e+d+yk++P++Lp +  +k+++++w+fFs+rd+ky++  r+nrat++gyWkatgkd+++ s 
  EcC014449.180  21 PPGFRFHPTDEELVLYYLKRKICRRKLRL-NIIPELDVYKWDPEELPgQsLLKSGDRQWFFFSHRDRKYPNAARSNRATRHGYWKATGKDRNIAS- 114
                    8***************************9.89**************96347788999**************************************. PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +g++vg+kktLvfy grap+ge+tdWvmhey+l
  EcC014449.180 115 NGRAVGVKKTLVFYIGRAPNGERTDWVMHEYTL 147
                    999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-6016170IPR003441NAC domain
PROSITE profilePS5100555.4820170IPR003441NAC domain
PfamPF023651.2E-2721147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0006886Biological Processintracellular protein transport
GO:0007264Biological Processsmall GTPase mediated signal transduction
GO:0055114Biological Processoxidation-reduction process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003723Molecular FunctionRNA binding
GO:0004004Molecular FunctionATP-dependent RNA helicase activity
GO:0004499Molecular FunctionN,N-dimethylaniline monooxygenase activity
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0005525Molecular FunctionGTP binding
GO:0016597Molecular Functionamino acid binding
GO:0016624Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0050661Molecular FunctionNADP binding
Sequence ? help Back to Top
Protein Sequence    Length: 566 aa     Download sequence    Send to blast
MTVEADASPA VVRRSERVSW PPGFRFHPTD EELVLYYLKR KICRRKLRLN IIPELDVYKW  60
DPEELPGQSL LKSGDRQWFF FSHRDRKYPN AARSNRATRH GYWKATGKDR NIASNGRAVG  120
VKKTLVFYIG RAPNGERTDW VMHEYTLDEE ELKRCQNVQD YYALYKVFKK SGPGPKNGEQ  180
YGAPFKEEDW ADDDYSAVTK VVDQEICPKE LPPISSVDIV GNNNQLLPPA NDIEEFFKEI  240
AEGPELEQPR YNNCDYLLPQ EEEAQSTLVD QSSREVVASE PLFAYGPSTP WNGSLANIDL  300
TQFGASQWQQ VQEASETTLA PECGTLETRV SEDFLEIDDL NNNDPSFFAK EKPAEDLQFN  360
DLDGLSELDI FHDAAMFLRD IGSMNHEDGG AAQMNCFDNG LINQYNHHQQ PPISNVVEQT  420
TSQLWVHEQT FEGYTSAEVV HGVQPCPSGF VGGSSSLPNE SSQNQIEEGG GVMSGFSSAI  480
WDFVDSIPTT PASASENAIV SRALGRMSSF SRLKVYSVSS DASAVKGDAV VKSSRRGFFL  540
LFVIGVLGAI LGVLIGSMRL WERFVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-481717014165NO APICAL MERISTEM PROTEIN
1ut4_B2e-481717014165NO APICAL MERISTEM PROTEIN
1ut7_A2e-481717014165NO APICAL MERISTEM PROTEIN
1ut7_B2e-481717014165NO APICAL MERISTEM PROTEIN
3swm_A2e-481717017168NAC domain-containing protein 19
3swm_B2e-481717017168NAC domain-containing protein 19
3swm_C2e-481717017168NAC domain-containing protein 19
3swm_D2e-481717017168NAC domain-containing protein 19
3swp_A2e-481717017168NAC domain-containing protein 19
3swp_B2e-481717017168NAC domain-containing protein 19
3swp_C2e-481717017168NAC domain-containing protein 19
3swp_D2e-481717017168NAC domain-containing protein 19
4dul_A2e-481717014165NAC domain-containing protein 19
4dul_B2e-481717014165NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010062193.10.0PREDICTED: NAC domain-containing protein 17
TrEMBLA0A059BT360.0A0A059BT36_EUCGR; Uncharacterized protein
STRINGXP_010062193.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-118NAC domain containing protein 17