PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC011895.40 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 193aa MW: 21981.7 Da PI: 9.3739 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 94.6 | 1.5e-29 | 48 | 125 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel..vglkktLvfykgrapkgektdWvmheyrl 128 e+e yfFs+r+ ky++g+r+nrat sg Wkatg d++v+s+++++ glk+tLvfykg+ap+g+ktdW+mhey+l EcC011895.40 48 DAEQERYFFSTREAKYPNGNRSNRATVSGKWKATGIDRRVVSSRSHQlvLGLKNTLVFYKGKAPHGSKTDWIMHEYHL 125 356689************************************95544449**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 32.956 | 1 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-12 | 40 | 125 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.62E-32 | 49 | 160 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0016810 | Molecular Function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MILATINYEE EEEKTDDVLA NQLSSSGRAS FQDFKVFKVV LSAVTSGDAE QERYFFSTRE 60 AKYPNGNRSN RATVSGKWKA TGIDRRVVSS RSHQLVLGLK NTLVFYKGKA PHGSKTDWIM 120 HEYHLVDGLA PDTALPPKMN LNRSPEVPRE NWVLCRIFFK RRSTKNDGHN HNIESFRTTN 180 EVSNVAEHIV LIE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-27 | 49 | 166 | 69 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-27 | 49 | 166 | 69 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-27 | 49 | 166 | 69 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-27 | 49 | 166 | 69 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-27 | 49 | 166 | 72 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-27 | 49 | 166 | 72 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-27 | 49 | 166 | 72 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-27 | 49 | 166 | 72 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-27 | 49 | 166 | 72 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-27 | 49 | 166 | 72 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-27 | 49 | 166 | 72 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-27 | 49 | 166 | 72 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-27 | 49 | 166 | 69 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-27 | 49 | 166 | 69 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010024206.1 | 3e-94 | PREDICTED: NAC domain-containing protein 83 | ||||
Swissprot | Q9FY93 | 3e-45 | NAC83_ARATH; NAC domain-containing protein 83 | ||||
TrEMBL | A0A059B348 | 7e-93 | A0A059B348_EUCGR; Uncharacterized protein | ||||
STRING | XP_010024206.1 | 1e-93 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-47 | NAC domain containing protein 83 |
Publications ? help Back to Top | |||
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