PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC011699.50
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 491aa    MW: 54284.8 Da    PI: 8.5299
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC011699.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.24.5e-551342611129
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                   lppGfrFhPtdee++++yL+kkv + +++   +i e+d++k+ePwdLpkk++ +eke yfF ++d+ky+tg r+nrat+sgyWkatgkdke+++ k+
  EcC011699.50 134 LPPGFRFHPTDEEIITHYLTKKVLNPNFNS-CAIGEADLNKCEPWDLPKKAHMGEKERYFFNQKDRKYPTGMRTNRATESGYWKATGKDKEIFRGKN 229
                   79*************************998.67***************999999****************************************99* PP

           NAM  98 elvglkktLvfykgrapkgektdWvmheyrle 129
                   +lvg+kktLvfykgrapkgekt+Wvmheyrle
  EcC011699.50 230 NLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 261
                   ******************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-60130285IPR003441NAC domain
PROSITE profilePS5100556.74134285IPR003441NAC domain
PfamPF023654.0E-28135260IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003333Biological Processamino acid transmembrane transport
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0045454Biological Processcell redox homeostasis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
NFPLSRRACQ AAPASSGQSP AGGRKSGWAL TVDAFSLGFV EQRPGRNLTA PRETWIGNGI  60
ISLGLNFSSQ VIGWRCVARE GIKKKRKSKT DLSSNNDKLS LAKISPVILL LIERAIGSVF  120
VSFLAAMEDE IVELPPGFRF HPTDEEIITH YLTKKVLNPN FNSCAIGEAD LNKCEPWDLP  180
KKAHMGEKER YFFNQKDRKY PTGMRTNRAT ESGYWKATGK DKEIFRGKNN LVGMKKTLVF  240
YKGRAPKGEK TNWVMHEYRL EGKFSYYNLP KVSKDEWVVS RIFHKSTGIK KNESGLISGL  300
FPIDPSGDDE LPNPSPSPSL PPLMDDSYFA RPISSFPKSE NDFPGMTSAS APRSAEGNYG  360
DEMNGFHRFN PSNTNYQTDP SSSAFSSMFS GQLSFPISPY DGTDNPDFFL GFGYGGSDNT  420
QAIIRGMAAS QHETQGLEQT LIKGEQFAMS NNKSVVSHSQ DTGLSTDANA ETSSSAISKH  480
EAGNFSDYLW E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-4813229115171NO APICAL MERISTEM PROTEIN
1ut4_B1e-4813229115171NO APICAL MERISTEM PROTEIN
1ut7_A1e-4813229115171NO APICAL MERISTEM PROTEIN
1ut7_B1e-4813229115171NO APICAL MERISTEM PROTEIN
4dul_A1e-4813229115171NAC domain-containing protein 19
4dul_B1e-4813229115171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036181.10.0PREDICTED: NAC domain-containing protein 92
TrEMBLA0A059A2Z70.0A0A059A2Z7_EUCGR; Uncharacterized protein
STRINGXP_010036181.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.11e-95Arabidopsis NAC domain containing protein 87