PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC011405.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 291aa    MW: 31435.8 Da    PI: 10.4212
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC011405.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY27.28e-09274291320
                   -SS-EEEEEEE--TT-SS CS
          WRKY   3 DgynWrKYGqKevkgsef 20 
                   D+y+WrKYGqK++kgs++
  EcC011405.10 274 DEYSWRKYGQKPIKGSPH 291
                   9**************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.0E-18225270IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.2E-8260291IPR003657WRKY domain
PROSITE profilePS5081110.9267291IPR003657WRKY domain
SuperFamilySSF1182904.18E-6269291IPR003657WRKY domain
PfamPF031066.2E-5274291IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAVELMLGYR NDTTFSAKME ETAVKEAASG LESVGKLIKL LSHSQIQPAP AQEAPPLDLD  60
RDCRAVADDA VSKFKNVISL LGRTRTGHAR FRRAPVQSAL DKLPGQHPHQ PKIYYATPIQ  120
QIPPTPAPVP ALPLGHYGGS AVISKSNGVV GERRDLSTTI SFSDASFPFG SSLTADNISG  180
NVNYNNVNER HVVVKQQQCS SSSTFQITSS SISGKPPLSS SSSLKRKCSS ETLGSGRCAS  240
SSGRCHCSKK RKLRLKRVVR VPAISLKMAD IPPDEYSWRK YGQKPIKGSP H
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028208.10.0PREDICTED: probable WRKY transcription factor 15
TrEMBLA0A059AMB70.0A0A059AMB7_EUCGR; Uncharacterized protein
STRINGXP_010028207.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17152887
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.24e-14WRKY DNA-binding protein 15