PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC010793.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 147aa    MW: 17157.5 Da    PI: 8.3069
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC010793.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.86.9e-3091352128
           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                   p+G+rF+Pt++el++++L+kk++g+  ++  vi+e+ iy++eP +L +      ++ ++ +e++fF++r +k      ++r+t+ g+Wk+t +++ +
  EcC010793.10   9 PVGLRFKPTENELISHHLTKKLKGEMETI-CVIPELYIYNWEPPELFArykelsSIPSDGSECFFFCPRGRK------RKRKTECGFWKETYSKRVI 98 
                   89**********************99777.78**************743455544455888*******9886......578899*********9999 PP

           NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +  +ge++gl++ Lv+ykgr++++++t+  m ey+l
  EcC010793.10  99 QAPdTGEEIGLRRGLVYYKGRQRNSQRTNLGMTEYHL 135
                   99888999****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-306140IPR003441NAC domain
PROSITE profilePS5100530.2198147IPR003441NAC domain
PfamPF023653.8E-199135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MAESTEAWPV GLRFKPTENE LISHHLTKKL KGEMETICVI PELYIYNWEP PELFARYKEL  60
SSIPSDGSEC FFFCPRGRKR KRKTECGFWK ETYSKRVIQA PDTGEEIGLR RGLVYYKGRQ  120
RNSQRTNLGM TEYHLNSNVS DSEISDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-1521359140Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17782RKRKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065770.14e-88PREDICTED: NAC domain-containing protein 14
RefseqXP_018732687.12e-88PREDICTED: protein NTM1-like 9
TrEMBLA0A059BBR24e-87A0A059BBR2_EUCGR; Uncharacterized protein
TrEMBLA0A059BC639e-87A0A059BC63_EUCGR; Uncharacterized protein
STRINGXP_010065770.12e-87(Eucalyptus grandis)
STRINGXP_010068321.16e-88(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19821971
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-28NAC transcription factor-like 9