PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC007649.70
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 87aa    MW: 9986.76 Da    PI: 6.6782
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC007649.70genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.9e-0918571255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  RR++i +++  L++l+P +    +k   Ka iL + ++YI+sLq
  EcC007649.70 18 RREKISERMKILQDLVPGC----NKVIGKALILDEIINYIQSLQ 57
                  9*****************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.284656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-61462IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-61857IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.46E-151876IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.78E-61861No hitNo description
Gene3DG3DSA:4.10.280.109.8E-161975IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006486Biological Processprotein glycosylation
GO:0006810Biological Processtransport
GO:0015074Biological ProcessDNA integration
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0005215Molecular Functiontransporter activity
GO:0008378Molecular Functiongalactosyltransferase activity
GO:0030246Molecular Functioncarbohydrate binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MTMVDQELKE NRVLLLARRE KISERMKILQ DLVPGCNKVI GKALILDEII NYIQSLQNQV  60
EFLSMKLEAV NSRMNINPTI DGFPAKD
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037625.14e-43PREDICTED: transcription factor bHLH79
SwissprotQ0JXE71e-34BPE_ARATH; Transcription factor BPE
TrEMBLA0A059A7P48e-42A0A059A7P4_EUCGR; Uncharacterized protein
STRINGXP_010037625.11e-42(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-37BIG PETAL P
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]