PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC002206.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 282aa    MW: 31703.3 Da    PI: 4.2014
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC002206.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.45.3e-102311617127
           NAM  17 eyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgra 113
                   +++   ++++ +++ +vi++v+ +++ P+ Lp      e+ wyf  + +         n+ ++ g+W   g+ +e++  +    g  +t  fy+gr 
  EcC002206.10  23 KFMFCMARADFFPA-NVITDVNPFNCLPKILP------ENMWYFTNSVE---------NKGAEGGFWMPRGEPREIFG-DAFINGWEETHEFYEGRG 102
                   55555555555666.78999999999999999......45677755544.........445689**************.9999************** PP

           NAM 114 pkgektdWvmheyr 127
                    + ektdW m ey 
  EcC002206.10 103 LQVEKTDWSMLEYY 116
                   *************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.6778140IPR003441NAC domain
SuperFamilySSF1019411.96E-1825140IPR003441NAC domain
PfamPF023653.2E-444115IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MCPPAVAPLF DLKNISSNEE LFKFMFCMAR ADFFPANVIT DVNPFNCLPK ILPENMWYFT  60
NSVENKGAEG GFWMPRGEPR EIFGDAFING WEETHEFYEG RGLQVEKTDW SMLEYYTTSK  120
VSGEALSAKD AKSLCKVFRS SSSPLSDSKM LQNAAGTEFR RENYLYFLPP DNFNIPTEQC  180
VTNQMQVNTT SRNIMRPASS FSPSHPIASL PELDHIDSGD YLELLDLDIP QSSSSRSDNS  240
SCMTMSSDEI FDYLVAMLDS EAESGDHVEH RDAGCNLNVS DS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060913.11e-177PREDICTED: uncharacterized protein LOC104448728
TrEMBLA0A059BP341e-175A0A059BP34_EUCGR; Uncharacterized protein
STRINGXP_010060914.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-12NAC domain containing protein 58