PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS74256.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 300aa MW: 34101.1 Da PI: 8.3372

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS74256.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.3	4.4e-10	23	62	5	41
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+ +NReAAr+sR++Kka+++eLe + ++Le+e EPS74256.1 23 KTLRRLVQNREAARKSRLKKKAYVQELESsrmRLAQLEEE 62 7789***********************9733355555554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.8E-8	17	69	No hit	No description
SMART	SM00338	2.8E-7	19	82	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	5.1E-9	20	69	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.002	21	65	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.0E-7	23	63	No hit	No description
PROSITE pattern	PS00036	0	26	41	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.3E-26	107	183	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
QRERNCRKPL STSEEAAKSS DPKTLRRLVQ NREAARKSRL KKKAYVQELE SSRMRLAQLE 60 EEIQRARAQG FQLGVMDQEP GLVPNVNHSA AVFDAEYGRW LEEQHILTEA LQRGLVDDMP 120 ENELALHLDN YLAHYHRMIQ LKSVLAKSDV FHLISGAWKT PAERCFLWMG GSRPSELLKI 180 VMSEVGAEGR MRGLHRSTAE AEERLSAGLE SLANSLSETL ICDSLAIPPN VDKYMAQMGV 240 AIDKLSTLEG FVRQADHLRQ ETLNRLRQIL TAREAAICFV AMAEYFHRLR ALSSLWILRP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269\|PubMed:12777042}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011075176.1	1e-132	bZIP transcription factor TGA10
Swissprot	Q52MZ2	1e-123	TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBL	S8D9P5	0.0	S8D9P5_9LAMI; Uncharacterized protein (Fragment)
STRING	XP_010265827.1	1e-124	(Nelumbo nucifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2279	21	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.1	1e-110	bZIP family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]