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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS74103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bZIP | ||||||||
Protein Properties | Length: 75aa MW: 8769.93 Da PI: 10.557 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 71.4 | 1.4e-22 | 9 | 71 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L + N+ Lk+e+++l +++akl+ e+ EPS74103.1 9 ERELKRERRKQSNRESARRSRLRKQAETEELANKVQALASDNMNLKSEINKLMENSAKLELEN 71 89*********************************************************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-15 | 5 | 68 | No hit | No description |
Pfam | PF00170 | 1.1E-20 | 9 | 71 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 3.5E-18 | 9 | 73 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.576 | 11 | 74 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.19E-12 | 12 | 67 | No hit | No description |
CDD | cd14702 | 2.65E-9 | 14 | 62 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 16 | 31 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence Send to blast |
INVTETQKER ELKRERRKQS NRESARRSRL RKQAETEELA NKVQALASDN MNLKSEINKL 60 MENSAKLELE NAALM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 31 | RRSRLRK |
2 | 25 | 32 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Trans-activator of a beta-glucuronidase (GUS) reporter gene. Binds to a G-box-related element, (5'-GCAACGTGGC-3'). Also binds to the HEX-motif of wheat histone H3 promoter. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093351.1 | 3e-30 | common plant regulatory factor 1 isoform X1 | ||||
Refseq | XP_011093357.1 | 3e-30 | common plant regulatory factor 1 isoform X3 | ||||
Refseq | XP_011093363.1 | 2e-30 | common plant regulatory factor 1 isoform X5 | ||||
Refseq | XP_020551515.1 | 3e-30 | common plant regulatory factor 1 isoform X2 | ||||
Refseq | XP_020551517.1 | 2e-30 | common plant regulatory factor 1 isoform X4 | ||||
Swissprot | Q99142 | 1e-29 | TAF1_TOBAC; Transcriptional activator TAF-1 (Fragment) | ||||
TrEMBL | S8EDR1 | 9e-42 | S8EDR1_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009593289.1 | 1e-27 | (Nicotiana tomentosiformis) | ||||
STRING | Migut.B01828.1.p | 6e-28 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3113 | 24 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.2 | 3e-19 | G-box binding factor 3 |
Publications ? help Back to Top | |||
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