PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS71747.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 287aa MW: 32587.5 Da PI: 9.4719

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS71747.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.1	2.6e-10	1	31	4	34
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 +k +rr ++NReAAr+sR RKka++++Le+ EPS71747.1 1 DKMQRRQAQNREAARKSRMRKKAYVQQLETA 31 589*************************974 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0049	1	80	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.117	1	44	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.13E-7	2	37	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.7E-7	2	44	No hit	No description
Pfam	PF00170	2.9E-7	2	35	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	5	20	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	5.6E-24	104	167	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence Send to blast
DKMQRRQAQN REAARKSRMR KKAYVQQLET ARMKLAHLEL QLQRARQHGF LITPPPPPPG 60 MGMYGTVNLG IAAFEMEYGQ WMDEQERKTS DLKTLLLLHP SDDATEELLH LTVDSVLSHY 120 CDLFRMKRDV ARYDSFYLVS GMWRTPLERF FLWIGGFRPS EIITVVKPHL GQLTEQQMAG 180 VGNLKQSCVQ AEDALSQGID KLQQTLSQGV AFLAEGVGNY ASQTASAMEK LESLEGFIGQ 240 ADHLRQKTLH QMARILTARQ AAMGLVAFGE YFLRLRGLSA LWTARYP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. {ECO:0000269\|PubMed:12897257}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011097899.1	1e-140	transcription factor TGA4 isoform X2
Swissprot	Q39234	1e-110	TGA3_ARATH; Transcription factor TGA3
TrEMBL	S8EGE3	0.0	S8EGE3_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.C00214.1.p	1e-132	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA780	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.6	1e-104	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885] Gangadharan A,Sreerekha MV,Whitehill J,Ham JH,Mackey D The Pseudomonas syringae pv. tomato type III effector HopM1 suppresses Arabidopsis defenses independent of suppressing salicylic acid signaling and of targeting AtMIN7. PLoS ONE, 2013. 8(12): p. e82032 [PMID:24324742] Herrera-Vásquez A, et al. Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis. Plant Mol. Biol. Rep., 2018. [PMID:26696694] Fang H, et al. The Ca2+ /calmodulin2-binding transcription factor TGA3 elevates LCD expression and H2 S production to bolster Cr6+ tolerance in Arabidopsis. Plant J., 2017. 91(6): p. 1038-1050 [PMID:28670772] Sarkar S, et al. Interaction of Arabidopsis TGA3 and WRKY53 transcription factors on Cestrum yellow leaf curling virus (CmYLCV) promoter mediates salicylic acid-dependent gene expression in planta. Planta, 2018. 247(1): p. 181-199 [PMID:28913593]