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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
EPS68232.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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| Family |
RAV |
| Protein Properties |
Length: 330aa MW: 36555.1 Da PI: 9.635 |
| Description |
RAV family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EPS68232.1 | genome | LSMU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 42.7 | 1.4e-13 | 41 | 89 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s++kGV + +grW ++I++ ++r++lg+f +eeAa+a++ a+++++g
EPS68232.1 41 SKFKGVVPQP-NGRWGSQIYEK-----HQRVWLGTFNEEEEAARAYDTAAQRFRG 89
79****9888.8*********3.....5*************************98 PP
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| 2 | B3 | 104.8 | 4.6e-33 | 162 | 264 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
f+k+ tpsdv+k++rlv+pk++ae+h +g++++++ l +ed g++W+++++y+++s++yvltkGW++Fvk+++L++gD+v+F+++ +++l++
EPS68232.1 162 FEKAVTPSDVGKLNRLVIPKQHAEKHfplqSGSNTKGVLLNFEDMAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKDLRAGDIVTFQRSTAPDKQLYID 260
89****************************7777899**************************************************887788888888 PP
EE-S CS
B3 96 vfrk 99
+ ++
EPS68232.1 261 WKSR 264
8665 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
LLGMKEDSSV SDSVSAAAAA AAARAVPMEG ETEESRKLPS SKFKGVVPQP NGRWGSQIYE 60
KHQRVWLGTF NEEEEAARAY DTAAQRFRGR DAVTNFKPLS ADESEILFLN SRSKPEIVDM 120
LRKHTYQDEL EQSRKNSGGG GFRGDFLAGG GRAAADHREH LFEKAVTPSD VGKLNRLVIP 180
KQHAEKHFPL QSGSNTKGVL LNFEDMAGKV WRFRYSYWNS SQSYVLTKGW SRFVKEKDLR 240
AGDIVTFQRS TAPDKQLYID WKSRNDGLSP AARVQPVQVV RLFGVNIFEV PTGGPTSAAA 300
VFDGGCCGGG KRMTEMEFDC AKKQRIINAL
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Transcriptional repressor of flowering time on long day plants. Acts directly on FT expression by binding 5'-CAACA-3' and 5'-CACCTG-3 sequences (Probable). Functionally redundant with TEM1. {ECO:0000250, ECO:0000269|PubMed:18718758, ECO:0000305}. |
| Publications
? help Back to Top |
- Leushkin EV, et al.
The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
BMC Genomics, 2013. 14: p. 476
[PMID:23855885] - Matías-Hernández L,Aguilar-Jaramillo AE,Marín-González E,Suárez-López P,Pelaz S
RAV genes: regulation of floral induction and beyond.
Ann. Bot., 2014. 114(7): p. 1459-70
[PMID:24812253] - Marín-González E, et al.
SHORT VEGETATIVE PHASE Up-Regulates TEMPRANILLO2 Floral Repressor at Low Ambient Temperatures.
Plant Physiol., 2015. 169(2): p. 1214-24
[PMID:26243615] - Sun YW, et al.
Attenuation of Histone Methyltransferase KRYPTONITE-mediated transcriptional gene silencing by Geminivirus.
Sci Rep, 2015. 5: p. 16476
[PMID:26602265] - Mittal A,Jiang Y,Ritchie GL,Burke JJ,Rock CD
AtRAV1 and AtRAV2 overexpression in cotton increases fiber length differentially under drought stress and delays flowering.
Plant Sci., 2015. 241: p. 78-95
[PMID:26706061] - Matías-Hernández L, et al.
TEMPRANILLO Reveals the Mesophyll as Crucial for Epidermal Trichome Formation.
Plant Physiol., 2016. 170(3): p. 1624-39
[PMID:26802039] - Li P, et al.
The Arabidopsis UGT87A2, a stress-inducible family 1 glycosyltransferase, is involved in the plant adaptation to abiotic stresses.
Physiol Plant, 2017. 159(4): p. 416-432
[PMID:27747895]
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