PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS68000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | Nin-like | ||||||||
Protein Properties | Length: 197aa MW: 22775.6 Da PI: 10.1292 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 68.9 | 7.1e-22 | 111 | 160 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l+dls+yF+lp+ AAke+++c++++K iCR+ G+kRWPhRki+s+ EPS68000.1 111 GKMKLKDLSEYFHLPMWVAAKEMKICQSAIKGICRKAGLKRWPHRKIRSI 160 6899********************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.358 | 95 | 180 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 7.1E-19 | 113 | 160 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
PIPISAWPVT PSPYSCSCCQ TLREIAHVNG AHVMKLEVHG SLGVISHAVL QKFFVYGHRN 60 LESHMFDFCN ETIWKVKQFL IEYCEDRKRE GYTMLPDPLS KQKGYPRERT GKMKLKDLSE 120 YFHLPMWVAA KEMKICQSAI KGICRKAGLK RWPHRKIRSI QRKIAKTKEQ LGSGNADERS 180 SALTQLQELQ RKLSNIY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011081629.1 | 7e-77 | uncharacterized protein LOC105164634 isoform X1 | ||||
TrEMBL | S8CMQ7 | 1e-146 | S8CMQ7_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_006474671.1 | 9e-54 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3505 | 20 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 1e-12 | RWP-RK domain-containing protein |
Publications ? help Back to Top | |||
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