PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS67764.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | B3 | ||||||||
Protein Properties | Length: 167aa MW: 19132.8 Da PI: 9.8413 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.8 | 1.2e-15 | 82 | 165 | 1 | 90 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k +++s+v+ +l lp f+++h ++++++++l de+g ++ k+ k++ l++GW++F+ +++L +gD +vF+l++ ++f EPS67764.1 82 FVKPMLQSHVTGGFWLGLPLGFCKRHL--PRRDVMMKLIDEEGGEFLAKYLSLKTG----LSGGWRGFAMDHELVDGDAIVFQLTEPTTF 165 89************************6..56899****************666665....***********************9764444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 4.32E-21 | 76 | 167 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.3E-16 | 76 | 167 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 2.32E-23 | 80 | 167 | No hit | No description |
Pfam | PF02362 | 4.7E-13 | 82 | 165 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 3.9E-15 | 82 | 167 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 11.632 | 82 | 167 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
KKVIRKPSEQ SLDLRRSRRV ADLPPKSYKE NAVEPQGKAR RSGHRRDLSN RVYASDEDRE 60 YATHRAEELQ SKLDQDTNYP SFVKPMLQSH VTGGFWLGLP LGFCKRHLPR RDVMMKLIDE 120 EGGEFLAKYL SLKTGLSGGW RGFAMDHELV DGDAIVFQLT EPTTFKV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836952.1 | 5e-79 | PREDICTED: B3 domain-containing protein At3g19184 isoform X1 | ||||
Swissprot | Q1G3M3 | 1e-60 | Y3918_ARATH; B3 domain-containing protein At3g19184 | ||||
TrEMBL | S8CKP0 | 1e-120 | S8CKP0_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.B00334.1.p | 2e-78 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1628 | 23 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 4e-63 | B3 family protein |
Publications ? help Back to Top | |||
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