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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS66609.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | WRKY | ||||||||
Protein Properties | Length: 100aa MW: 12060.6 Da PI: 9.8744 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.5 | 3.2e-29 | 40 | 100 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++ g+++prsYYrCt++ +C+++k+v+rs++dp+++e+tY+g+H ++ EPS66609.1 40 EDSYSWRKYGQKDILGAKYPRSYYRCTYRlmrHCWATKQVQRSDDDPTFFEVTYKGTHSCN 100 7***************************9999**************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.2E-28 | 27 | 100 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 21.092 | 34 | 100 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.06E-26 | 36 | 100 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.5E-32 | 39 | 100 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.6E-26 | 40 | 99 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence Send to blast |
FFSKEKSKMN AISYRKRIQP VWREQVKIKT ENGLEEGPSE DSYSWRKYGQ KDILGAKYPR 60 SYYRCTYRLM RHCWATKQVQ RSDDDPTFFE VTYKGTHSCN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-19 | 27 | 98 | 7 | 75 | Disease resistance protein RRS1 |
5w3x_D | 2e-19 | 27 | 98 | 7 | 75 | Disease resistance protein RRS1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020551475.1 | 8e-47 | probable WRKY transcription factor 53 | ||||
Swissprot | Q8H0Y8 | 2e-41 | WRK41_ARATH; Probable WRKY transcription factor 41 | ||||
TrEMBL | S8CHX8 | 9e-70 | S8CHX8_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009613243.1 | 2e-44 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1843 | 24 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 4e-44 | WRKY family protein |
Publications ? help Back to Top | |||
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