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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EPS65907.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
|
Family |
C2H2 |
Protein Properties |
Length: 198aa MW: 22203.1 Da PI: 9.4136 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EPS65907.1 | genome | LSMU | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 12 | 0.00064 | 117 | 139 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ C+++F+++ L H +H
EPS65907.1 117 FVCSSCKRVFNSHQALGGHRASH 139
89**************9999888 PP
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Protein Features
? help Back to Top |
 |
Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF13912 | 4.7E-8 | 39 | 63 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.11 | 39 | 61 | IPR015880 | Zinc finger, C2H2-like |
SuperFamily | SSF57667 | 2.3E-5 | 40 | 61 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 41 | 61 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 2.3E-5 | 112 | 139 | No hit | No description |
Pfam | PF13912 | 1.9E-9 | 117 | 140 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.39 | 117 | 139 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.972 | 117 | 144 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 119 | 139 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 6.97E-5 | 169 | 195 | No hit | No description |
Pfam | PF13912 | 8.3E-9 | 170 | 194 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 8.683 | 170 | 197 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.59 | 170 | 192 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 172 | 192 | IPR007087 | Zinc finger, C2H2 |
Sequence ? help Back to Top |
Protein Sequence Length: 198 aa
Download sequence Send
to blast |
QQTPRRKRRR KTSEFSVEPA GVSRPAARRP DPHAPNITTP CPECYRTFWS WKALFGHMRC 60 HPKRQYRGIN PPENFHRRQG KAPAEEEEFK AEDYEVASYL LMLANGPPMD GPHVGRFVCS 120 SCKRVFNSHQ ALGGHRASHK NVKGCYAITK NDDDDGAAAC CSPSSSTTGH KCVICQRIFT 180 SGQALGGHLR CHWEKAAE
|
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 4 | 10 | RRKRRRK |
2 | 5 | 9 | RKRRR |
Functional Description ? help
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Source |
Description |
UniProt | Mediates the regulation of male germ cell division by DUO1. {ECO:0000269|PubMed:24876252}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Activated by the transcription factor DUO1. {ECO:0000269|PubMed:21285328}. |