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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
EPS64783.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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| Family |
TCP |
| Protein Properties |
Length: 140aa MW: 16240.5 Da PI: 10.5142 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EPS64783.1 | genome | LSMU | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 153.5 | 1.3e-47 | 1 | 125 | 4 | 135 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskksqk 102
kkdrhski+T++g+RdRRvRls+ +a++fFdLq++LG+dk+skt++WLl+++k aikel++ ++++ +s +s+++ g+++ +++++++s+k
EPS64783.1 1 KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGVDKPSKTLDWLLTKSKSAIKELVQKKQKKG-------ESRPDSKEGGGEEEDEEEEEEESRK 92
8*************************************************************66666.......2222222333344555556666666 PP
TCP 103 saasalnlakesrakarararertrekmriknk 135
++ +++ +akesrakarararertrekm+ikn
EPS64783.1 93 KKCTNNTIAKESRAKARARARERTREKMCIKNM 125
6666799999********************986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 140 aa
Download sequence Send
to blast |
KKDRHSKIYT SQGPRDRRVR LSIGIARKFF DLQEMLGVDK PSKTLDWLLT KSKSAIKELV 60
QKKQKKGESR PDSKEGGGEE EDEEEEEEES RKKKCTNNTI AKESRAKARA RARERTREKM 120
CIKNMNVASG INQLQFLQLF
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Involved in the dorsovental asymmetry of flowers. Retards growth rate and reduces organ number in the dorsal region of flowers. Binds specifically to the DNA sequence 5'-GGNCCCNC-3', and is able to bind to the RAD promoter sequence in vivo. {ECO:0000269|PubMed:16236768, ECO:0000269|PubMed:8893002}. |
| UniProt | Involved in the dorsovental asymmetry of flowers. Retards growth rate and reduces organ number in the dorsal region of flowers (By similarity). {ECO:0000250}. |
| Publications
? help Back to Top |
- Vieira CP,Vieira J,Charlesworth D
Evolution of the cycloidea gene family in Antirrhinum and Misopates.
Mol. Biol. Evol., 1999. 16(11): p. 1474-83
[PMID:10555278] - Gubitz T,Caldwell A,Hudson A
Rapid molecular evolution of CYCLOIDEA-like genes in Antirrhinum and its relatives.
Mol. Biol. Evol., 2003. 20(9): p. 1537-44
[PMID:12832647] - Reeves PA,Olmstead RG
Evolution of the TCP gene family in Asteridae: cladistic and network approaches to understanding regulatory gene family diversification and its impact on morphological evolution.
Mol. Biol. Evol., 2003. 20(12): p. 1997-2009
[PMID:12885953] - Costa MM,Fox S,Hanna AI,Baxter C,Coen E
Evolution of regulatory interactions controlling floral asymmetry.
Development, 2005. 132(22): p. 5093-101
[PMID:16236768] - Leushkin EV, et al.
The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
BMC Genomics, 2013. 14: p. 476
[PMID:23855885] - Luo D,Carpenter R,Vincent C,Copsey L,Coen E
Origin of floral asymmetry in Antirrhinum.
Nature, 1996. 383(6603): p. 794-9
[PMID:8893002]
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