PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS63595.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bZIP
Protein Properties Length: 265aa    MW: 28852.4 Da    PI: 9.0362
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS63595.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1513.1e-16182237559
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke.vakl 59 
                 +++rr++kNRe+A rsRqRK+a++ +Le  v++Le+ N +L +e  e++ + +++l
  EPS63595.1 182 QKQRRMIKNRESAARSRQRKQAYTVQLESQVAQLEEDNARLLEEEAEWNRKrYEQL 237
                 79**************************************9998888865504444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.3E-12178243IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.852180225IPR004827Basic-leucine zipper domain
PfamPF001704.5E-14182239IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.56E-11182232No hitNo description
CDDcd147071.12E-18182222No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-14183237No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
SSKVMASRSS QPNQDAPRQP SMRSDAGRGL GSMNIDDILR SIYSDSESLA LDSGAGSSAG  60
NRNKAMEEVW QEIGNESIDG GPPITLENYL ARAGAVNEED VRVSAAAGTM PSPAAAAAAF  120
RMDSAAIVHG SEFPEVPFAA APCMQNALAV GGFGVEFAVS GGGRGKRRSS MAELALDKVT  180
QQKQRRMIKN RESAARSRQR KQAYTVQLES QVAQLEEDNA RLLEEEAEWN RKRYEQLMEK  240
VIPVVERGRA GKRVIPIRRV RSMEW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552830.14e-79G-box-binding factor 4-like
TrEMBLS8C9W20.0S8C9W2_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.B00653.1.p8e-71(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27712452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.12e-26G-box binding factor 4
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]