PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS62739.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 400aa MW: 44302.9 Da PI: 8.0518

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS62739.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.6	6.4e-09	108	151	4	47
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 k+ rr+++NReAAr+sR RKk ++++Le+ +L + ++Lkk EPS62739.1 108 QKALRRLAQNREAARKSRMRKKVYVQQLENSRLKLAQLEQELKK 151 5889*************************977777776666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-4	105	158	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	6.0E-5	107	150	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.255	107	151	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.5E-7	109	154	No hit	No description
SuperFamily	SSF57959	1.34E-6	109	152	No hit	No description
PROSITE pattern	PS00036	0	112	127	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.4E-31	199	272	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence Send to blast
YYFFKNVFVL FVGAQSLPST GVFSSAGATG MDSSRFIFQK GPNVGNGNGA LGNGPYENWG 60 DSGVVADQSQ HTDTSTDTDD KNQITGAHHE RMQIPDSMHE TKGKYGDQKA LRRLAQNREA 120 ARKSRMRKKV YVQQLENSRL KLAQLEQELK KARQQPVVPF HSNGFSGGDH QHHSVAGNGW 180 GSAFDAVYAK WLDEHQQLIS DLRSALNSQA GESELRLLVE GVMTHYDEIF RLKSVAAKSD 240 VFHMLSGMWK SPAERCFMWL GGFRCSEVLK ILGNHIEPLT EQQLVGICNL QQSSLQAEDA 300 LSQGMEALQQ SLVETLSSNS FGPCNSGNVA DYMGQMAVAM SKLATLGNFL HQADLLRQQT 360 LQQLQRILTS HQAANALLAI SDYRARLRAL SSLWLARPKE

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence Send to blast

YYFFKNVFVL FVGAQSLPST GVFSSAGATG MDSSRFIFQK GPNVGNGNGA LGNGPYENWG  60
DSGVVADQSQ HTDTSTDTDD KNQITGAHHE RMQIPDSMHE TKGKYGDQKA LRRLAQNREA  120
ARKSRMRKKV YVQQLENSRL KLAQLEQELK KARQQPVVPF HSNGFSGGDH QHHSVAGNGW  180
GSAFDAVYAK WLDEHQQLIS DLRSALNSQA GESELRLLVE GVMTHYDEIF RLKSVAAKSD  240
VFHMLSGMWK SPAERCFMWL GGFRCSEVLK ILGNHIEPLT EQQLVGICNL QQSSLQAEDA  300
LSQGMEALQQ SLVETLSSNS FGPCNSGNVA DYMGQMAVAM SKLATLGNFL HQADLLRQQT  360
LQQLQRILTS HQAANALLAI SDYRARLRAL SSLWLARPKE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011077152.1	0.0	transcription factor HBP-1b(c38)-like
Swissprot	Q41558	1e-146	HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBL	S8C7H6	0.0	S8C7H6_9LAMI; Uncharacterized protein (Fragment)
STRING	EOY02112	0.0	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA820	23	85

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-117	bZIP family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]