PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 316aa MW: 35739.7 Da PI: 8.3464

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS58512.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.8	3.6e-11	24	64	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ L++ ++L EPS58512.1 24 KTLRRLAQNREAARKSRLRKKAYVQQLETSRMRLTQLEQEL 64 7789************************9777776665554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-9	19	66	No hit	No description
SMART	SM00338	1.8E-9	20	83	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.312	22	66	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.3E-8	24	64	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.19E-8	24	67	No hit	No description
CDD	cd14708	9.59E-22	24	76	No hit	No description
PROSITE pattern	PS00036	0	27	42	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	6.5E-30	117	190	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence Send to blast
QGNRKGASAA TTSEHDGPKT PDPKTLRRLA QNREAARKSR LRKKAYVQQL ETSRMRLTQL 60 EQELQRARSQ GLYLGGQAAL VGGDQGLPVS MANMNSDATL FDMEYARWQE EHHRIVEELR 120 KAVSDQVPEN DLRIFVDNCV GHYDHVLNLK GMIAKSDVFH LLSGMWKTPA ERCFMWIGGF 180 RPSELIKIVA REVEEMTEHQ LMGICGLQQT TQDAEDALSQ GLDTLNQSLS QAIIADSLAV 240 PPNMNSYMSQ MALAITKLST LEAFITQADS LRHQTLHRLH QILTTRQSAR CFLAMAEYFH 300 RLRALSSLWL ARPRQD

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269\|PubMed:12777042}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00491	DAP	Transfer from AT5G06839	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027066449.1	0.0	bZIP transcription factor TGA10-like isoform X2
Swissprot	Q52MZ2	1e-180	TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBL	S8DGL5	0.0	S8DGL5_9LAMI; Uncharacterized protein (Fragment)
STRING	XP_009611363.1	1e-180	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2279	21	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.1	1e-148	bZIP family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]