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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
EPS57974.1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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| Family |
HD-ZIP |
| Protein Properties |
Length: 358aa MW: 40076.8 Da PI: 7.9677 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EPS57974.1 | genome | LSMU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.5 | 2.6e-19 | 8 | 65 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++t+eq+e+Le++++++++psa +r++L +++ +++ +q+kvWFqNrR +ek+
EPS57974.1 8 YVRYTPEQVEALERVYYECPKPSALRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 65
6789****************************************************97 PP
|
| 2 | START | 153.2 | 2.2e-48 | 154 | 357 | 2 | 199 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEX CS
START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.dsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvae 97
+aee+++e+++ka+ ++ W +++ +++g++++ +++ s++ + + a+ra+ +v ++a v+e+l+dk+ W ++++++++++v+s++ g+++l +++
EPS57974.1 154 FAEETLTEFLSKATGTAVKWIQMPGMKPGPDSIGIVAISHGsSGVVASRACCLVGLEPA-RVAEILKDKLSWYRDCRAVDVVNVLSTAagGTIELVYMQ 251
6899************************************99999**************.9**************************999********* PP
XTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHH CS
START 98 lqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaeg 192
l+a+++l+p Rdf+ +Ry+ + +g++ ++++S++ ++ p+ +++vR+e lpSg+li+p+++g+s +++v+h dl+++ ++ +r l+ks++ +
EPS57974.1 252 LYAPTTLAPaRDFWLLRYTSVMDDGTLSVCERSLNDARNGPSmppVQHFVRGEILPSGYLIRPCEGGGSIIHIVDHHDLESWNAPEFIRMLYKSSTLLA 350
*************************************9999888899**************************************************** PP
HHHHHHH CS
START 193 aktwvat 199
++t++a
EPS57974.1 351 QRTTLAV 357
***9986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MGFDGGKYVR YTPEQVEALE RVYYECPKPS ALRRQQLIRE CPILSNIEPK QIKVWFQNRR 60
CREKQRKESS QLQSVNRKLS AMNRLLMEEN ERLQKQVSQL VYENTSFRQQ SHNATTLAAT 120
DNSCDSVVTS GQHHHHLTLQ NPLQEASPSG LLSFAEETLT EFLSKATGTA VKWIQMPGMK 180
PGPDSIGIVA ISHGSSGVVA SRACCLVGLE PARVAEILKD KLSWYRDCRA VDVVNVLSTA 240
AGGTIELVYM QLYAPTTLAP ARDFWLLRYT SVMDDGTLSV CERSLNDARN GPSMPPVQHF 300
VRGEILPSGY LIRPCEGGGS IIHIVDHHDL ESWNAPEFIR MLYKSSTLLA QRTTLAVM
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in the regulation of vascular development. May promote differentiation of precambial and cambial cells. {ECO:0000269|PubMed:11402194, ECO:0000269|PubMed:15598805}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By auxin. Repressed by miR165. {ECO:0000269|PubMed:17237362, ECO:0000269|PubMed:8575317}. |
| Publications
? help Back to Top |
- Heyndrickx KS,Vandepoele K
Systematic identification of functional plant modules through the integration of complementary data sources.
Plant Physiol., 2012. 159(3): p. 884-901
[PMID:22589469] - Leushkin EV, et al.
The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
BMC Genomics, 2013. 14: p. 476
[PMID:23855885] - Hategan L,Godza B,Kozma-Bognar L,Bishop GJ,Szekeres M
Differential expression of the brassinosteroid receptor-encoding BRI1 gene in Arabidopsis.
Planta, 2014. 239(5): p. 989-1001
[PMID:24488524] - Baima S, et al.
Negative feedback regulation of auxin signaling by ATHB8/ACL5-BUD2 transcription module.
Mol Plant, 2014. 7(6): p. 1006-1025
[PMID:24777988] - Kakehi J, et al.
Mutations in ribosomal proteins, RPL4 and RACK1, suppress the phenotype of a thermospermine-deficient mutant of Arabidopsis thaliana.
PLoS ONE, 2015. 10(1): p. e0117309
[PMID:25625317] - Jia X, et al.
Functional plasticity of miR165/166 in plant development revealed by small tandem target mimic.
Plant Sci., 2015. 233: p. 11-21
[PMID:25711809] - Liu S, et al.
Expression of wild-type PtrIAA14.1, a poplar Aux/IAA gene causes morphological changes in Arabidopsis.
Front Plant Sci, 2015. 6: p. 388
[PMID:26082787] - Yamaguchi YL, et al.
Root-Knot and Cyst Nematodes Activate Procambium-Associated Genes in Arabidopsis Roots.
Front Plant Sci, 2017. 8: p. 1195
[PMID:28747918] - Yamazaki K, et al.
Suppression of DELLA signaling induces procambial cell formation in culture.
Plant J., 2018. 94(1): p. 48-59
[PMID:29383774]
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