PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT33859
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 648aa    MW: 69992.3 Da    PI: 8.7194
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT33859genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.49.4e-09810435125
       NAM  35 kevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgek..tdWvmhe 125
                +vdiy ++P++L +     +++ +++ +yf s  + k+a + r++r++  g+W++     +++s  ++  g+++t+ +   g++++gek  t  +m+e
  EMT33859   8 LDVDIYGSNPRQLLEshapaTASDGTSALYFLSVVRAKTAGDYRERRSVPGGFWRSDRAPVPLVS--EAIQGTRRTFFYTeLGSHSHGEKigTGFMMQE 104
               589**********633455344345557799999999999999**************99999998..7889******9985357777765448888888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.9221128IPR003441NAC domain
SuperFamilySSF1019416.41E-133128IPR003441NAC domain
PROSITE profilePS5001123.524216577IPR000719Protein kinase domain
SMARTSM002209.6E-11294550IPR000719Protein kinase domain
PfamPF077147.8E-32298477IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
SuperFamilySSF561122.16E-54300524IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.203.7E-13301342No hitNo description
Gene3DG3DSA:1.10.510.104.6E-33343479No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 648 aa     Download sequence    Send to blast
MLPPYILLDV DIYGSNPRQL LESHAPATAS DGTSALYFLS VVRAKTAGDY RERRSVPGGF  60
WRSDRAPVPL VSEAIQGTRR TFFYTELGSH SHGEKIGTGF MMQELILVGE EEARQGGDGL  120
TLCKIYVSPH GGRDAPGIAN SINKRKIGEQ GVASSSKRRK MVAGAASFSP APVRAASAPA  180
PALRPAPALP ASRLHLLGAC GIHLPERSQA IARSGDRQVP PHGTGEYLEA YNLRSCGDSG  240
WDKANFRLHQ FGPLREEDAG NRKFSRYLKP CSGYPSPVIH LSGDKCGDIR LPERSLPRCI  300
KVAIKVLNPN GLHGNKEFCT GAMALSRIYH PNLLKLGGFC TDDNQRILIY EYMPLGSLEK  360
HIFDLSPHKK ALDWNTRINI LAGAAEGLKH LHVNCNPAEI HGDVKSGNIL LGEGCHPKLS  420
NFGLAKLGPP GDNTHVPTRV MGTSGYCAPE YLESGELTIK SDVFSFGVVI VEVITGRNAL  480
GWSLTRAEPT LAEWATPLTR RNDFTKYADP ALGNKYNKKS LLQVVHSPSS TSGMELITGE  540
LIFFGTIGFV IDDSTRIAEA LLDVDSLPAC GVTHYRVDDS GVLYRQPSGP YQAAGGPAVR  600
HHQKRSGKGN RNTNDGNATG HEGGEERVGN GTRGGATYLT QEQIAVWA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_A3e-55300519119336Probable serine/threonine-protein kinase PBL2
6j5t_D3e-55300519119336Probable serine/threonine-protein kinase PBL2
6j5t_I3e-55300519119336Probable serine/threonine-protein kinase PBL2
6j5t_J3e-55300519119336Probable serine/threonine-protein kinase PBL2
6j5t_M3e-55300519119336Probable serine/threonine-protein kinase PBL2
6j5u_C3e-55300519119336Probable serine/threonine-protein kinase PBL2
6j5v_C3e-55300519119336Probable serine/threonine-protein kinase PBL2
6j6i_A3e-55300519119336Probable serine/threonine-protein kinase PBL2
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143159KRKIGEQGVASSSKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020173746.11e-156proline-rich receptor-like protein kinase PERK3
TrEMBLN1R4Z80.0N1R4Z8_AEGTA; Serine/threonine-protein kinase PBS1
STRINGEMT338590.0(Aegilops tauschii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.23e-07WRKY family protein