 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT33698 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
Family |
MYB |
Protein Properties |
Length: 470aa MW: 52008.8 Da PI: 6.7832 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT33698 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 35.3 | 2.7e-11 | 156 | 193 | 7 | 45 |
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
Ed+ l + ++++G ++W t+a+ ++ gR++ qc+ rw+
EMT33698 156 VEDKALTQMINKHGLKNWQTVAHAIP-GRSAPQCRQRWR 193
59************************.***********8 PP
|
2 | Myb_DNA-binding | 38.5 | 2.7e-12 | 202 | 244 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
+ +W+++E+++l++a++ +G++ W+ ++++ gRt +k++w+
EMT33698 202 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 244
579*******************.*********.***********7 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 470 aa
Download sequence Send
to blast |
MAPQNYTCDR QVNRARHKFG YRVRHRNVPG LASGACSLNF WVVDGDAGVS EMGKLLQPML 60 LADSGVLPSH VTDRRFDAEG AQNDCLAEDP GKQLVWCESE GRGALNGQLT IASLLFRVNV 120 KVEVIDQLLF SNPPTVCLME ISVPKCYITI EDKKKVEDKA LTQMINKHGL KNWQTVAHAI 180 PGRSAPQCRQ RWRYKIDSAI NKEAWSEQEE LRLIRAHQIY GTKWREMVKH FPGRTNGAIK 240 EYWRGPMKRK LNSYLSSGLL EQFPDILENL SGTQNNSLDI LKGTKVSDIL NDTEGSSERN 300 EMSSAVPRIS ISEVGFTEVG ENADVPGGES ADFIYARVAS AKAPENIIAR SEQHAKTRRK 360 LDLLSSPVEL KSSSHEVNSQ RPLQQREQMS PAVGGVSPSN GCHDVLPKIL SECAKPVLSP 420 TGSYQPSDVH SAGTSDPCSL ELDISDLMEM SYFDNLLIFP PGSPHDGNSL
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF951905 | 0.0 | JF951905.1 Triticum aestivum clone TaMYB22 R2R3-MYB protein mRNA, complete cds. |