PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT33420
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 687aa    MW: 76826.6 Da    PI: 8.0163
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT33420genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.7e-151202011299
               HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                ++ +v+p + ++++gg++  s t++le+++ ++++v +   kk +r+vl +GW+ Fv+an+++e+ +++F+++g s+f  +v vf++
  EMT33420 120 FKDSVVIPQRLMNHFGGDT--SGTIKLESPNAQVYDVGV--AKKVNRTVLLSGWEAFVDANQIQENNSLMFRYIGFSCF--KVAVFDS 201
               45669*******8889995..559***************..*********************************99999..9998886 PP
2B343.75e-14449540494
               E-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
        B3   4 vltpsdvlks.grlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
               ++t+s+v+ s   lv+ + + ++h  k  + +t+tl+ + g ++W   + +r+ sg+yvl +GW +Fv+ n+L+e D+++++ +++ ++++++v
  EMT33420 449 QMTKSNVNGSrPSLVICRGYGRAHFPK--GRQTITLRLPVGkKKWHAIFHIRRDSGGYVLYGGWVDFVRGNNLREQDVCLLQPMDKgEGRRFTV 540
               5666666555467***********633..45699999988879******99*******************************775546665554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.617109202IPR003340B3 DNA binding domain
SMARTSM010192.3E-8112202IPR003340B3 DNA binding domain
SuperFamilySSF1019366.67E-16112206IPR015300DNA-binding pseudobarrel domain
CDDcd100171.28E-14112200No hitNo description
Gene3DG3DSA:2.40.330.101.2E-16114203IPR015300DNA-binding pseudobarrel domain
PfamPF023625.1E-13120201IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.5E-10277368IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.67E-10279378IPR015300DNA-binding pseudobarrel domain
CDDcd100176.24E-9283362No hitNo description
SMARTSM010190.047285383IPR003340B3 DNA binding domain
PROSITE profilePS508636.499285383IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.5E-17439538IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.49E-19440544IPR015300DNA-binding pseudobarrel domain
CDDcd100174.14E-17444543No hitNo description
SMARTSM010193.2E-7446548IPR003340B3 DNA binding domain
PROSITE profilePS508639.939447545IPR003340B3 DNA binding domain
PfamPF023621.3E-12449540IPR003340B3 DNA binding domain
SuperFamilySSF1019363.53E-9584683IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.047590684IPR003340B3 DNA binding domain
CDDcd100172.20E-6612682No hitNo description
Gene3DG3DSA:2.40.330.102.5E-10612684IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.305622684IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    Send to blast
MIVDEDNDDF PFGRVLEQEC RWDHLESQSD NNEKHSIKTK GFEYKSSLLP PPSSSISNMS  60
ASNDNDVINM ARPRSRLYRR RLPQPHPAQH RSSMAPAAMS DPCDCCKSKV KFIRQMRGNF  120
KDSVVIPQRL MNHFGGDTSG TIKLESPNAQ VYDVGVAKKV NRTVLLSGWE AFVDANQIQE  180
NNSLMFRYIG FSCFKVAVFD SNGEERILCR ARMGNPSHVE KPSMHRSVVL ASPLDGTTQS  240
SDSDDCYITP GKIPAVKYSA DEFSGEQMEE IEAFVSKIQS EIPVLVVKMN KTNVSDYPDL  300
VIHKEYAGAY FPPRTRFVTL KVPENSKGWQ CKFCIRPVGG HNLYLRDFVP DNHVQEGDLC  360
LFQPITEVEA TNFAIMVHLL SKAGRAGIPS NQGGDNPHEC GSICLDQRET SSKLHYVLSS  420
RCRLDEEDVA EVDALGTKIQ PDIPFLVVQM TKSNVNGSRP SLVICRGYGR AHFPKGRQTI  480
TLRLPVGKKK WHAIFHIRRD SGGYVLYGGW VDFVRGNNLR EQDVCLLQPM DKGEGRRFTV  540
IVHLLPKARS TSRKVRSGYV VLGDGTCLTL PQEKIVAERV KVIQSEAPIY VAIIDKSSYF  600
ALDLGAMGGA PADGHLPDGA QTLVLRQAGW SKAWHAEMLD RRMLPGGGWH EFAADNRLQA  660
GDLCLLEPVK GEVLAMSVHI IRREQYY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020185957.10.0B3 domain-containing protein Os03g0620400-like
TrEMBLN1R5L80.0N1R5L8_AEGTA; B3 domain-containing protein
STRINGEMT334200.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58531172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-14B3 family protein