PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT32940 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | NAC | ||||||||
Protein Properties | Length: 205aa MW: 23000.1 Da PI: 6.9105 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.5 | 1e-13 | 7 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk...kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 +G+ F+Pt el+ +yL +++ + + +i+e d++++ P+ L + + ++ w +fF+ + + + ++ + g W++ g++k+ + + EMT32940 7 AGCVFQPTGCELIGHYLIPRAGLGGVFFPGIIEEGvDVLSLCPRALSFpenHRRDYDEVWgFFFAAKPA-GE--TWTTP-DAGGCWEQYGQEKAYYGGegG 103 79*******************999987777877655**********63232333355678555555444.33..33444.357************998767 PP NAM 97 gelvglkktLvfy.kg.rapkgektdWvmheyrl 128 +e+v ++ +++ + + + + t+W m+eyrl EMT32940 104 REAVAFRRRFAYRyTCrDGEVISLTRWRMKEYRL 137 77899*****99633314444568********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 19.218 | 5 | 166 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.02E-16 | 6 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.8E-11 | 7 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MANLAAAGCV FQPTGCELIG HYLIPRAGLG GVFFPGIIEE GVDVLSLCPR ALSFPENHRR 60 DYDEVWGFFF AAKPAGETWT TPDAGGCWEQ YGQEKAYYGG EGGREAVAFR RRFAYRYTCR 120 DGEVISLTRW RMKEYRLNRN AAAFRRAHPG PVPPDVVFVV HKVYKKPLIT PPPPPDSSSS 180 EDEGSESYIV YPQLDEIMRR LTMGN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020158493.1 | 1e-149 | uncharacterized protein LOC109743813 | ||||
TrEMBL | M8C6I3 | 1e-150 | M8C6I3_AEGTA; Uncharacterized protein | ||||
STRING | EMT32940 | 1e-151 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12891 | 22 | 31 |