PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32446
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 347aa    MW: 37638.5 Da    PI: 8.4584
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32446genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.52e-26169228258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               dDgy+WrKYGqK++ gs++prsYYrCt++   gC +kkkv+r +++p + e+tY g+H +
  EMT32446 169 DDGYTWRKYGQKDILGSKYPRSYYRCTHKnyyGCDAKKKVQRLDDNPFMYEVTYCGDHSC 228
               8***************************99999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-26161228IPR003657WRKY domain
SuperFamilySSF1182902.75E-24165228IPR003657WRKY domain
SMARTSM007741.9E-36168230IPR003657WRKY domain
PfamPF031067.2E-25169228IPR003657WRKY domain
PROSITE profilePS5081121.379169227IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MDDALSQISQ AFRLAGELMG ELQASQNGPA YIAARCHDIV HAYNRAIRML QHYGVGEVAA  60
AAPLDILRPC STDEAGASQF LGETPAHLAH RKEPFHMPAG VFGARVAPQH TMCAGAGVGT  120
SGGPMRRLPS SRSPPAVQPR QGRRRRESGK RETVLVPAQR TGNTELPPDD GYTWRKYGQK  180
DILGSKYPRS YYRCTHKNYY GCDAKKKVQR LDDNPFMYEV TYCGDHSCLT STTPLLILPT  240
ASTTTSAANS PTAATGSGLP TRDLPMEAAK QTHSATPVKL GISWMPASFQ GILAGSVTGM  300
GTIANMKMNV STTPRDTDYP TLDLADVMFN FSSSMDDIFS SYDRHDT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-20169228968OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198551.10.0uncharacterized protein LOC109784377
TrEMBLM8D7J70.0M8D7J7_AEGTA; WRKY transcription factor 55
STRINGEMT324460.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97963344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-36WRKY DNA-binding protein 55