PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT31884
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CPP
Protein Properties Length: 264aa    MW: 28339.3 Da    PI: 4.6388
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT31884genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR45.41.6e-14643542
       TCR  5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42
              +C+C+k++Cl++YC Cf+a ++C+e C+C++C+N+e++
  EMT31884  6 HCTCEKTQCLQRYCHCFEASVFCDEGCSCQGCRNTEDN 43
              8*********************************9975 PP
2TCR49.58.6e-1685122239
       TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
               + kgCnC++s+C+k+YCeCf++g+ Cs++C+C++C N+
  EMT31884  85 HVKGCNCRNSECKKLYCECFKHGVGCSDKCQCTGCANT 122
               689**********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011149.9E-10243IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163427.5463124IPR005172CRC domain
PfamPF036384.7E-11641IPR005172CRC domain
SMARTSM011142.4E-1284125IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.5E-1187122IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MDDLPHCTCE KTQCLQRYCH CFEASVFCDE GCSCQGCRNT EDNSDEVDER AECIMKKKPD  60
AFKPKIIAGD GPGLQQQQQR AAGVHVKGCN CRNSECKKLY CECFKHGVGC SDKCQCTGCA  120
NTFGVKGAAQ QAHSDSPEGT SGGSGETLAR SNGSSAIIND DMASQLTETS IMDDIHIPSE  180
LSHMDVDLGP PTQTLGDGGL EDIIFYSDFQ HNIDPQAHQG LAQQADASLS NDANSLLEQG  240
PSKTDTCDLL HHGSQINKLS GIRS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A9e-12712114120Protein lin-54 homolog
5fd3_B9e-12712114120Protein lin-54 homolog
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-133HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020148968.10.0protein tesmin/TSO1-like CXC 2
TrEMBLM8CBZ90.0M8CBZ9_AEGTA; Uncharacterized protein
STRINGEMT318840.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122672336
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04850.12e-32Tesmin/TSO1-like CXC domain-containing protein