PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT31805 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | NAC | ||||||||
Protein Properties | Length: 300aa MW: 33458.7 Da PI: 5.7276 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 132 | 4.4e-41 | 28 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 lppGfrFhPtd+elvv+yL++kv+g++ ++ +i+evd+yk++PwdLp+++ +++ewyfF++rd+ky++g+ +nr++ +gyWkatg dk+v +++++ EMT31805 28 LPPGFRFHPTDDELVVHYLCRKVAGQPQPV-PIIAEVDLYKFNPWDLPERALFGSREWYFFTPRDRKYPNGSPPNRSAGTGYWKATGADKPVERTRRA--- 124 79*************************999.88***************8777899*************************************993332... PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 grap+g+ktdW+mheyr+ EMT31805 125 -------AAGRAPRGVKTDWIMHEYRI 144 .......369***************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.12E-54 | 24 | 170 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 43.399 | 28 | 170 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.8E-21 | 29 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence Send to blast |
MVKAESTTAA AAAEGSSGRR DAEAELNLPP GFRFHPTDDE LVVHYLCRKV AGQPQPVPII 60 AEVDLYKFNP WDLPERALFG SREWYFFTPR DRKYPNGSPP NRSAGTGYWK ATGADKPVER 120 TRRAAAGRAP RGVKTDWIMH EYRIAEADRA PGKKGSLKLD EWVLCRLYNK KNNWEKLKVE 180 QDMAVEAGPN GEVMDALATD AMSDSFQTHD SSEIDSASGL QQHGFMDMAQ GQPRGGMVTV 240 KEDSDWFTGL SMDDLQTCYM NMGQMVNPAT MPGQNGSGYL QPMSSPQMMR PMWQTILPPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-85 | 15 | 176 | 2 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | GQ985329 | 0.0 | GQ985329.1 Triticum aestivum transcription factor TaNAC4 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020181126.1 | 0.0 | NAC domain-containing protein 68-like | ||||
Swissprot | Q52QH4 | 1e-140 | NAC68_ORYSJ; NAC domain-containing protein 68 | ||||
TrEMBL | M8C3G8 | 0.0 | M8C3G8_AEGTA; Uncharacterized protein | ||||
STRING | EMT31805 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5389 | 37 | 61 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 1e-71 | NAC domain containing protein 32 |