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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
EMT31736 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
MYB |
| Protein Properties |
Length: 341aa MW: 37441.1 Da PI: 7.0855 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT31736 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 47.9 | 3.2e-15 | 42 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.......................-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.......................tWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEd llvd++ ++G g + ++++++g++Rt+k+c++rw++yl
EMT31736 42 RGPWTAEEDMLLVDYISKHGEGrwnslarcaahysprsllkfffaNLGLVSARVGLRRTGKSCRLRWLNYL 112
89********************999999999999999999999999999999999**************97 PP
|
| 2 | Myb_DNA-binding | 53.3 | 6.2e-17 | 118 | 161 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++
EMT31736 118 RGNITPEEQLLILDLHSRWGNR-WSKIAQRLP-GRTDNEVKNYWRT 161
7999******************.*********.***********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MDKEYYKACM GMEALPMSPA GLSAGATMAA ATASEDEGDL KRGPWTAEED MLLVDYISKH 60
GEGRWNSLAR CAAHYSPRSL LKFFFANLGL VSARVGLRRT GKSCRLRWLN YLRPDVRRGN 120
ITPEEQLLIL DLHSRWGNRW SKIAQRLPGR TDNEVKNYWR TRVQKHAKQL HCDVNSDRFR 180
DVVRQVWMPR LLERIQAESS SSAAAAAGVG VPALTRAMSS PAGASQYHCF DHASSGEPSR 240
KVAVTMSPDT SSTLRSSLSP AETSHGAHFP AWGAATTTAN VDGSMMQCAG PEAGAIGGDH 300
YVIHGDSLSG SWSELLAATD IPDFEFGNFD DNLWSLEDIY C
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor involved in abiotic stress responses. Plays a regulatory role in tolerance to salt, cold, and drought stresses. Regulates positively the expression of genes involved in proline synthesis and transport, and genes involved in reactive oxygen species (ROS) scavenging such as peroxidase, superoxide dismutase and catalase during salt stress. Transactivates stress-related genes, including LEA3, RAB16A and DREB2A during salt stress. {ECO:0000269|PubMed:22301384}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt, cold and osmotic stresses, and abscisic acid (ABA). Down-regulated by salicylic acid (SA). {ECO:0000269|PubMed:22301384}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EF587267 | 0.0 | EF587267.1 Triticum aestivum R2R3 Myb-like protein (PIMP1) mRNA, complete cds. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Yang A,Dai X,Zhang WH
A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice.
J. Exp. Bot., 2012. 63(7): p. 2541-56
[PMID:22301384] - Chen X, et al.
The NAC family transcription factor OsNAP confers abiotic stress response through the ABA pathway.
Plant Cell Physiol., 2014. 55(3): p. 604-19
[PMID:24399239] - Lv Y, et al.
New insights into the genetic basis of natural chilling and cold shock tolerance in rice by genome-wide association analysis.
Plant Cell Environ., 2016. 39(3): p. 556-70
[PMID:26381647] - Hong Y,Zhang H,Huang L,Li D,Song F
Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
Front Plant Sci, 2016. 7: p. 4
[PMID:26834774]
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