PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Binding Motif |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

EMT31467

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

Nin-like

Protein Properties

Length: 830aa MW: 91520.1 Da PI: 7.7079

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT31467	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.6	2.4e-28	514	564	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ EMT31467 514 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 564 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.45	503	584	IPR003035	RWP-RK domain
Pfam	PF02042	9.5E-25	517	564	IPR003035	RWP-RK domain
SuperFamily	SSF54277	4.91E-20	722	815	No hit	No description
Gene3D	G3DSA:3.10.20.240	1.3E-23	729	813	No hit	No description
PROSITE profile	PS51745	19.144	732	815	IPR000270	PB1 domain
SMART	SM00666	1.4E-20	732	815	IPR000270	PB1 domain
CDD	cd06407	5.98E-40	733	813	No hit	No description
Pfam	PF00564	1.1E-15	733	813	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 830 aa Download sequence Send to blast
MGRALSSEGD LDLLEQLLSG DNAWLEVAPN TSRSPNFFAS PSTFLSDATT TTTTPASTNN 60 ALWIQSGSST VRQRLDQALA YIKEMQRDVG MLVQLWVPIK SGEGQLVLST SGQPFTLDET 120 SERLRQFREV STRYQFSADV ASESSPIGLP GRVFIGKLPE WSPDVRYFTS YEYPRVNHAQ 180 YLDVHGTMGL PVFEKGSYSC LGVMELIMTR QKLNFTSEIN NICSALQAVN LRSTEVSSIP 240 RATKFNSASY KDALPEILEV LRAACVTHKL PLAQTWVTCA QQEKRGSRHS DENYRHCIST 300 IDAACYVNDP QMQNFHESCS DHHLLRDQGV AGKAFSTNQP CFLPDIGSST KMEYPLSHHA 360 KIFNLKGAVA IRLRCTRTGT ADFVLEFFLP TNCEALEEQK AVLDSLSGTM RSTCRTLRVV 420 TDKEMGDEKM LEVNELNSFG PQGKNKVEEL SFGDQATEHR EEASWTSLAG TSKESDLAEL 480 SIHGMLSPVG QGLSPAGAQT SAQGSKGKRR TKTEKTVSLP VLRQYFAGSL KDAARSLGVC 540 PTTLKRICRQ HGINRWPSRK IKKVDHSLRK LQQIIDSVHG GETAFQLNTL YKDLTNTSVS 600 SDNNLSGSVT VPPHKQSNLT DFEGHRHHRL NSNVPSTSHS HSSCSQSSDS SPSSCSGGST 660 KHPPQAGVDL LMSGNPVNHS PVQTLQTENA SIRGHFPVQE APDLLHNLNQ KALGGQHSSR 720 SPSPPKQNAD AGMRIKATFG SEKVRFRLKP ECSFQELKQE MARRLSIVDT SFLIVKYLDD 780 DLEWVLMTCD ADLQECLHVY KLANLQTVKI SVHLAPIREA RVTIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 830 aa Download sequence Send to blast

MGRALSSEGD LDLLEQLLSG DNAWLEVAPN TSRSPNFFAS PSTFLSDATT TTTTPASTNN  60
ALWIQSGSST VRQRLDQALA YIKEMQRDVG MLVQLWVPIK SGEGQLVLST SGQPFTLDET  120
SERLRQFREV STRYQFSADV ASESSPIGLP GRVFIGKLPE WSPDVRYFTS YEYPRVNHAQ  180
YLDVHGTMGL PVFEKGSYSC LGVMELIMTR QKLNFTSEIN NICSALQAVN LRSTEVSSIP  240
RATKFNSASY KDALPEILEV LRAACVTHKL PLAQTWVTCA QQEKRGSRHS DENYRHCIST  300
IDAACYVNDP QMQNFHESCS DHHLLRDQGV AGKAFSTNQP CFLPDIGSST KMEYPLSHHA  360
KIFNLKGAVA IRLRCTRTGT ADFVLEFFLP TNCEALEEQK AVLDSLSGTM RSTCRTLRVV  420
TDKEMGDEKM LEVNELNSFG PQGKNKVEEL SFGDQATEHR EEASWTSLAG TSKESDLAEL  480
SIHGMLSPVG QGLSPAGAQT SAQGSKGKRR TKTEKTVSLP VLRQYFAGSL KDAARSLGVC  540
PTTLKRICRQ HGINRWPSRK IKKVDHSLRK LQQIIDSVHG GETAFQLNTL YKDLTNTSVS  600
SDNNLSGSVT VPPHKQSNLT DFEGHRHHRL NSNVPSTSHS HSSCSQSSDS SPSSCSGGST  660
KHPPQAGVDL LMSGNPVNHS PVQTLQTENA SIRGHFPVQE APDLLHNLNQ KALGGQHSSR  720
SPSPPKQNAD AGMRIKATFG SEKVRFRLKP ECSFQELKQE MARRLSIVDT SFLIVKYLDD  780
DLEWVLMTCD ADLQECLHVY KLANLQTVKI SVHLAPIREA RVTIGHTGLS

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00154	DAP	Transfer from AT1G20640	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK358600	0.0	AK358600.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1079K24.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020196253.1	0.0	protein NLP1-like isoform X2
TrEMBL	A0A453LJV7	0.0	A0A453LJV7_AEGTS; Uncharacterized protein
STRING	EMT31467	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5554	38	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein