 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT30943 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
C2H2 |
| Protein Properties |
Length: 194aa MW: 20502.2 Da PI: 8.0951 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT30943 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.4 | 5.2e-05 | 47 | 69 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ Cgk F+++ L H +H
EMT30943 47 FRCSVCGKAFPSHQALGGHKASH 69
89*************99998887 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0055062 | Biological Process | phosphate ion homeostasis |
| GO:2000280 | Biological Process | regulation of root development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0001047 | Molecular Function | core promoter binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MTHDDYVHLC LMALASVATG GDQAQAAEGQ WLHTVTAAAP AACELRFRCS VCGKAFPSHQ 60
ALGGHKASHR KRAALVLPLQ SVSPAEETVA SSTSSGVGGH RCSVCHRSFA TGQALGGHKR 120
CHYWDGLSVS LTASASGSGS SVRDFDLNLT PVPEKAAAAG MRRWGEEEEV QSPLPFKKRR 180
LSSPSLELNL ILLD
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in abscisic acid (ABA) signaling. Required for the regulation of the cross-talk between NADPH oxidase, hydrogen peroxide and MAP kinase in ABA signaling. Regulates the expression of the NADPH oxidase genes RBOHB and RBOHE, and the MAPK genes MPK1, MPK4, MPK5, MPK7 and MPK14. Regulates ABA-induced hydrogen peroxide production and antioxidant defense. Required for tolerance to water stress and oxidative stress. {ECO:0000269|PubMed:25071223}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) and hydrogen peroxide. {ECO:0000269|PubMed:25071223}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Yilmaz A, et al.
GRASSIUS: a platform for comparative regulatory genomics across the grasses.
Plant Physiol., 2009. 149(1): p. 171-80
[PMID:18987217] - Zhang H, et al.
A novel rice C2H2-type zinc finger protein, ZFP36, is a key player involved in abscisic acid-induced antioxidant defence and oxidative stress tolerance in rice.
J. Exp. Bot., 2014. 65(20): p. 5795-809
[PMID:25071223] - Li W, et al.
A Natural Allele of a Transcription Factor in Rice Confers Broad-Spectrum Blast Resistance.
Cell, 2017. 170(1): p. 114-126.e15
[PMID:28666113]
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