 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT30632 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
C3H |
Protein Properties |
Length: 130aa MW: 14443.3 Da PI: 8.8105 |
Description |
C3H family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT30632 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-CCCH | 50.4 | 3.6e-16 | 56 | 81 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS
zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26
+ktelC+ + +tG C+yGd+C+FaHg
EMT30632 56 FKTELCNKWEETGACPYGDQCQFAHG 81
79***********************9 PP
|
2 | zf-CCCH | 20.2 | 1e-06 | 94 | 119 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS
zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26
ykte Cr + + C+yG rC+F H+
EMT30632 94 YKTEVCRMVLNGEVCPYGHRCHFRHS 119
9******999966**********998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051511 | Biological Process | negative regulation of unidimensional cell growth |
GO:1901347 | Biological Process | negative regulation of secondary cell wall biogenesis |
GO:0003729 | Molecular Function | mRNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 130 aa
Download sequence Send
to blast |
MNQATPAAAT PAAYTRKPSS QRAYAGPGAD GGKKGEEQKT KQDAAGELDV YNQGMFKTEL 60 CNKWEETGAC PYGDQCQFAH GVSELRPVIR HPRYKTEVCR MVLNGEVCPY GHRCHFRHSL 120 TAAERLLRSR
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 1e-163 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |