 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT30398 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
Dof |
| Protein Properties |
Length: 355aa MW: 36588.8 Da PI: 8.474 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT30398 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 123.9 | 5.4e-39 | 17 | 76 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+e++++cprC+s ntkfCyynnys+sqPryfCkaCrryWt+GG+lrnvP+Ggg+rk k+s
EMT30398 17 PEQKVECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNVPIGGGCRKPKRS 76
7899*****************************************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0048364 | Biological Process | root development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MAGEAIAGAE KKPRPKPEQK VECPRCKSGN TKFCYYNNYS MSQPRYFCKA CRRYWTHGGS 60
LRNVPIGGGC RKPKRSGTSD AHKLGVASSP EPTTVVPPST CTGMNFANVL PTFMSVGFEI 120
PSSLSLTAFG SSSSSNTAAM MSPGGTTSFL DVLRGGAGGL LDGSLSQNNG YYYGGPAIGS 180
GNGMLMTPPA ASFGIPVPMQ QHGDLVVGGN GIGAATASIF QGATSEEGDD GTGGVMGLQW 240
QPQVGNGGGG GGVSGGVHHL GTGNNVTMGN SNIHNNNNND SGGDDNNGGS SRDCYWINNG 300
GSNPWQSLLN SSSLMKFLGI VFRSSKGCFT SISSINMSLF GRDSLFQVGL KGVEN
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY496057 | 0.0 | AY496057.2 Triticum aestivum Dof DNA-binding protein mRNA, complete cds. |
| GenBank | KC849701 | 0.0 | KC849701.1 Triticum aestivum cultivar Chinese Spring clone CSPBF01 zf-Dof domain protein (pbf) gene, complete cds. |
| GenBank | KJ544772 | 0.0 | KJ544772.1 Aegilops tauschii cultivar AS2386 prolamin binding factor gene, complete cds. |
