PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

EMT29513

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

WRKY

Protein Properties

Length: 264aa MW: 29072.3 Da PI: 10.1133

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT29513	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.4	7.8e-30	80	137	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+v+ +tY+ +Hnh+ EMT29513 80 DSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTVLLVTYSYDHNHP 137 99**********************998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	7.9E-31	70	139	IPR003657	WRKY domain
SuperFamily	SSF118290	7.45E-26	76	139	IPR003657	WRKY domain
SMART	SM00774	4.6E-35	78	138	IPR003657	WRKY domain
Pfam	PF03106	1.8E-25	80	137	IPR003657	WRKY domain
PROSITE profile	PS50811	31.433	80	139	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MSDCSTGTDS PRADSVDEQP PADAESPGGG QSKRDQPSPS SPLPPPKRSR RSVEKRVVSV 60 PIAECGERAK TNGEGPPPPD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR 120 ADPTVLLVTY SYDHNHPWPA PKTGCHPNKS SPRLVDPKPE PGTPVECQPE QGPEAPEQEQ 180 EEEHEPWRRR RRTGSASCRG RTRSSRGWAS SRSAPSCSAA GASSPWRPPR PAPDRRASLP 240 FRSRFPPFFS FPPAVVFTRS NLEV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5w3x_B	1e-19	55	140	6	80	Disease resistance protein RRS1
5w3x_D	1e-19	55	140	6	80	Disease resistance protein RRS1
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Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	192	RRRRRT

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EF397614	0.0	EF397614.1 Triticum aestivum cultivar Nongda 3338 WRKY13 transcription factor (WRKY13) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020185102.1	1e-127	probable WRKY transcription factor 65
TrEMBL	M8C626	0.0	M8C626_AEGTA; Putative WRKY transcription factor 65
STRING	EMT29513	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7088	36	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29280.1	3e-38	WRKY DNA-binding protein 65