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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT29383 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
HD-ZIP |
Protein Properties |
Length: 213aa MW: 24211.5 Da PI: 10.6593 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT29383 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 58.9 | 8.1e-19 | 60 | 113 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq++ Le F+++r++ + ++ +LA++lgL+ +qV vWFqNrRa++k
EMT29383 60 KKRRLTDEQVHGLELSFREERKLETGRKVHLAAELGLDPKQVAVWFQNRRARHK 113
45689***********************************************99 PP
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2 | HD-ZIP_I/II | 112.5 | 2.7e-36 | 60 | 147 | 2 | 89 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
kkrrl++eqv+ LE sF+ee+kLe+ rKv+la eLgl+p+qvavWFqnrRAR+k+k +E+++++Lk+a+da + ++++Le+e ++++
EMT29383 60 KKRRLTDEQVHGLELSFREERKLETGRKVHLAAELGLDPKQVAVWFQNRRARHKSKLMEEEFAKLKHAHDAAVLHKCHLENESIQIKA 147
9*********************************************************************************998876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MDKQQVFGSS YVDMPFFAAN GAATAQGESR PRARRRRRRA ARCGGGDGDG GEMDGGGDPK 60 KRRLTDEQVH GLELSFREER KLETGRKVHL AAELGLDPKQ VAVWFQNRRA RHKSKLMEEE 120 FAKLKHAHDA AVLHKCHLEN ESIQIKAHAA ATRRRWWAFR SRVEHPLDQE PTVHEVALQI 180 VEPPTESEMT PKRKRRRPVV ATFHSSLLAT CLI
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 29 | 38 | RPRARRRRRR |
2 | 33 | 41 | RRRRRRAAR |
3 | 190 | 197 | PKRKRRRP |
4 | 191 | 196 | KRKRRR |
5 | 192 | 196 | RKRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB490234 | 1e-152 | AB490234.1 Hordeum vulgare subsp. vulgare HvHox2 mRNA for homeodomain leucine zipper protein class 1, complete cds. |
GenBank | AK368464 | 1e-152 | AK368464.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2074A10. |