PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT29367 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 28413.6 Da PI: 4.4124 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 51.6 | 1.9e-16 | 207 | 243 | 23 | 59 |
EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 sY+rCt+++C+vkk+ver ++d ++v++tYeg+H+h+ EMT29367 207 SYFRCTHSNCRVKKRVERLSTDCRMVITTYEGRHTHP 243 9***********************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 7.7E-9 | 200 | 244 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.24E-13 | 206 | 244 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.3E-14 | 206 | 243 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.021 | 207 | 243 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-11 | 207 | 243 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MAYCLPNLSV PDHYYTTPVP LSPLQLPFHP KPLQMPFDQE EALMLSSDHC GLYPLPALPF 60 GGGPSPAAPA TVCEKPTVGF MPNIEAEEVG TSVTARVGYE GVTACNGYSS NTWVQVEGLD 120 DVGGGEGEDE GEEEDEGAEV LLPDQKRRGC AGRWLQVEEI RAEGCQEQSP SQINTEGLTE 180 FCSIIWKRKS SKPSISSGAN LLLSDWSYFR CTHSNCRVKK RVERLSTDCR MVITTYEGRH 240 THPPCDDNSS SSGDNTTTCF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FP098149 | 3e-67 | FP098149.1 Phyllostachys edulis cDNA clone: bphyem124o14, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020184573.1 | 1e-113 | probable WRKY transcription factor 12 | ||||
TrEMBL | M8CPD6 | 0.0 | M8CPD6_AEGTA; Putative WRKY transcription factor 12 | ||||
STRING | EMT29367 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1138 | 38 | 130 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44745.1 | 5e-18 | WRKY family protein |