PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT29229
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 843aa    MW: 93676.7 Da    PI: 6.57
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT29229genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B389.52.6e-28290185
              EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
        B3  1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85
              f+kv tpsd++k++rlv+pk++ae++     +++ ++  l +ed+ g+ W+++++y+++s++yv+tkGW++Fvk+ +L++gD+v Fk+ 
  EMT29229  2 FDKVVTPSDTGKLNRLVIPKQHAEKYfpldASSNDNGLLLDFEDSAGKPWRFRYSYWNSSQSYVMTKGWSRFVKETRLEAGDIVSFKRG 90
              89***************************9445557889************************************************43 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.104.4E-36190IPR015300DNA-binding pseudobarrel domain
CDDcd100175.03E-23189No hitNo description
SMARTSM010192.4E-202107IPR003340B3 DNA binding domain
PROSITE profilePS5086313.9872105IPR003340B3 DNA binding domain
PfamPF023621.1E-25290IPR003340B3 DNA binding domain
SuperFamilySSF1019361.18E-26289IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF511011.83E-32100246IPR001229Jacalin-like lectin domain
PROSITE profilePS5175228.98101248IPR001229Jacalin-like lectin domain
Gene3DG3DSA:2.100.10.301.9E-34101247IPR001229Jacalin-like lectin domain
CDDcd096121.21E-31112246IPR033734Jacalin-like lectin domain, plant
SMARTSM009154.9E-5112248IPR001229Jacalin-like lectin domain
PfamPF014197.0E-19116247IPR001229Jacalin-like lectin domain
SuperFamilySSF511011.57E-32261319IPR001229Jacalin-like lectin domain
Gene3DG3DSA:2.100.10.301.0E-33261317IPR001229Jacalin-like lectin domain
PROSITE profilePS5175229.242262438IPR001229Jacalin-like lectin domain
SMARTSM009151.3E-5320438IPR001229Jacalin-like lectin domain
Gene3DG3DSA:2.100.10.301.0E-33352438IPR001229Jacalin-like lectin domain
SuperFamilySSF511011.57E-32353438IPR001229Jacalin-like lectin domain
PfamPF014193.2E-16356438IPR001229Jacalin-like lectin domain
PROSITE profilePS5001126.337390691IPR000719Protein kinase domain
SMARTSM002201.9E-11426688IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.206.0E-4504526No hitNo description
SuperFamilySSF561129.3E-44506692IPR011009Protein kinase-like domain
PfamPF000693.5E-32527686IPR000719Protein kinase domain
Gene3DG3DSA:1.10.510.104.7E-41527699No hitNo description
PROSITE patternPS001080545557IPR008271Serine/threonine-protein kinase, active site
PROSITE profilePS5020215.237708838IPR000535Major sperm protein (MSP) domain
SuperFamilySSF493544.19E-16723838IPR008962PapD-like
Gene3DG3DSA:2.60.40.3601.5E-15723836IPR008962PapD-like
PfamPF006352.6E-10724809IPR000535Major sperm protein (MSP) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0009908Biological Processflower development
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0030246Molecular Functioncarbohydrate binding
Sequence ? help Back to Top
Protein Sequence    Length: 843 aa     Download sequence    Send to blast
MFDKVVTPSD TGKLNRLVIP KQHAEKYFPL DASSNDNGLL LDFEDSAGKP WRFRYSYWNS  60
SQSYVMTKGW SRFVKETRLE AGDIVSFKRG VGEAARGRAY ITKIGPWGGN RGNFNDIKVS  120
PLRLNSITIR SGEVIYSLAF SYSDNYGKQH HAGPSGGCKD FSYGSFDTIQ LGPSEFLTKV  180
SGTIAFSAQY SSNVITSVMF ITTARRYGPF GGGVGIPFQS PVMSNGSIVG FFAHAEWVVE  240
SIGLYVNSES KLWEPMKGQD SVTKIGPWGG DSGRPNDVNV LPRRLLSVVV RNSTVISSLT  300
FTYIDWDGQP QTAGPWGGLG ESFDGKVDTG NPWVPKSMTF FTEYSLQHAT LTITCYTKAE  360
IILGRSEFLT EVSGTLGWNS GYSDVVTSLY FVTNTGGYGP YGKGGGTRFR SSHSNGSIVG  420
FFVNAADVID AIGVYFSPER ETCKEKMLKI RLIWRKEALG FHVVWLTEKV DAVIRVEIES  480
ASNDLEHIVL DQSAEPTNLP LALLKDITED FNDKRQIGRG GFGIVYKIIR GICDGLVYLH  540
TEKGIVHRDM KPENILLDDL MIPKITDFGI SKLLDGATHA VTSDPTGSRG YCAPEFIARG  600
EVSTRSDIYS LGVIITELVT GCKDEPHIQN LDRVRAEVLR RWRYRWNESA NYPPFGYQQV  660
SKCIEIALKC LSDSPKKRPK ISDIVSMLNT MESTKEHITN VGNSPAGQIS AYPWELLEFD  720
LLELNFPFEI NKKIPCSLQL TNVTDDYVAF DIEMMGILRY CIEPEKRVVP PRSKCNVMVT  780
LQPHERVPHA MVCKDELFIL RCAAVSEGLT AEDISEDMLN KKSGKEEADK VTLKVVILPI  840
TVD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5os9_A1e-471967102B3 domain-containing transcription factor NGA1
5os9_B1e-471967102B3 domain-containing transcription factor NGA1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3666011e-100AK366601.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2044K15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193609.10.0uncharacterized protein LOC109779403
TrEMBLM8C4Q60.0M8C4Q6_AEGTA; B3 domain-containing protein
STRINGEMT292290.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2261944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.17e-49B3 family protein