 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT28826 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
YABBY |
| Protein Properties |
Length: 223aa MW: 25088.1 Da PI: 10.396 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT28826 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 39 | 2.9e-12 | 47 | 145 | 22 | 134 |
YABBY 22 lavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekr 122
++v vP + l+ +vtv+CGhC +l ++ + +++ + + ++ ++ + + +++ +++ s +++ +pr+p v++PPek+
EMT28826 47 FLVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPPMVQPLSPN------------DH--HHPMGPFQGCTDCRRNQPLPPLASPTSSDASPRAPFVVKPPEKK 133
689*******************9866444444444444443............22..22333334444444433333333566778899************ PP
YABBY 123 qrvPsaynrfik 134
r Psaynrf++
EMT28826 134 HRLPSAYNRFMR 145
**********85 PP
|
| 2 | YABBY | 47.6 | 6.5e-15 | 161 | 192 | 131 | 162 |
YABBY 131 rfikeeiqrikasnPdishreafsaaaknWah 162
+ ++eeiqrika+ Pdi hreafs+aaknWa
EMT28826 161 CALREEIQRIKAAKPDIPHREAFSMAAKNWAK 192
5689**************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006333 | Biological Process | chromatin assembly or disassembly |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009827 | Biological Process | plant-type cell wall modification |
| GO:0009860 | Biological Process | pollen tube growth |
| GO:0009909 | Biological Process | regulation of flower development |
| GO:0010093 | Biological Process | specification of floral organ identity |
| GO:0010254 | Biological Process | nectary development |
| GO:0010582 | Biological Process | floral meristem determinacy |
| GO:0031540 | Biological Process | regulation of anthocyanin biosynthetic process |
| GO:0048441 | Biological Process | petal development |
| GO:0048443 | Biological Process | stamen development |
| GO:0048479 | Biological Process | style development |
| GO:0048481 | Biological Process | plant ovule development |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MDKSRPYHAV SSQYSTKLNA HMSGQTTQVD LPRVIRRSFS MQLFRWFLVG VPCKRLMDTV 60
TVKCGHCNNL SFLSPRPPPM VQPLSPNDHH HPMGPFQGCT DCRRNQPLPP LASPTSSDAS 120
PRAPFVVKPP EKKHRLPSAY NRFMRLIGHG RKCTILVSCC CALREEIQRI KAAKPDIPHR 180
EAFSMAAKNW AKCDPRCSST VSASNSAPEP RIIVPGPQKY DRY
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Regulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF545436 | 1e-155 | AF545436.1 Triticum aestivum CRC-related protein mRNA, complete cds. |
